Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   MOP79_RS09555 Genome accession   NZ_CP102583
Coordinates   1875470..1876180 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A062WVH4
Organism   Streptococcus pneumoniae strain D39Mega17545     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1870470..1881180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOP79_RS09540 - 1871624..1873159 (+) 1536 WP_000929854.1 ABC transporter ATP-binding protein -
  MOP79_RS09545 - 1873152..1874210 (+) 1059 WP_000038653.1 ABC transporter permease -
  MOP79_RS09550 - 1874213..1875169 (+) 957 WP_000022879.1 ABC transporter permease -
  MOP79_RS10620 - 1875254..1875355 (+) 102 Protein_1895 transposase -
  MOP79_RS09555 treR 1875470..1876180 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  MOP79_RS09560 treP 1876365..1878332 (+) 1968 WP_000514308.1 PTS system trehalose-specific EIIBC component -
  MOP79_RS09565 treC 1878510..1880135 (+) 1626 WP_000171206.1 alpha,alpha-phosphotrehalase -
  MOP79_RS09570 - 1880277..1880525 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=717900 MOP79_RS09555 WP_000760673.1 1875470..1876180(-) (treR) [Streptococcus pneumoniae strain D39Mega17545]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=717900 MOP79_RS09555 WP_000760673.1 1875470..1876180(-) (treR) [Streptococcus pneumoniae strain D39Mega17545]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTTCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATCCCAAATCTCACTCGCCAAATCGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A062WVH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593