Detailed information NTG0717631

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: NUU05_RS05080
• Genome accession: NZ_CP102538
• Coordinates: 970468..971349 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain TH-4
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 965468..976349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUU05_RS05050 (NUU05_05030)	-	966477..966929 (+)	453	WP_011681214.1	hypothetical protein	-
NUU05_RS05055 (NUU05_05035)	-	966919..967422 (+)	504	WP_011681213.1	hypothetical protein	-
NUU05_RS05060 (NUU05_05040)	galE	967437..968450 (+)	1014	WP_011681212.1	UDP-glucose 4-epimerase GalE	-
NUU05_RS05065 (NUU05_05045)	-	968639..968875 (+)	237	WP_002946959.1	DUF1146 family protein	-
NUU05_RS05070 (NUU05_05050)	murA	968945..970216 (+)	1272	WP_011681211.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
NUU05_RS05075 (NUU05_05055)	-	970218..970406 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
NUU05_RS05080 (NUU05_05060)	endA	970468..971349 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
NUU05_RS05085 (NUU05_05065)	-	971421..972071 (-)	651	WP_011226088.1	amino acid ABC transporter permease	-
NUU05_RS05090 (NUU05_05070)	-	972083..972781 (-)	699	WP_011681209.1	amino acid ABC transporter permease	-
NUU05_RS05095 (NUU05_05075)	-	972799..973632 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
NUU05_RS05100 (NUU05_05080)	-	973644..974411 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
NUU05_RS05105 (NUU05_05085)	vicR	974935..975642 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=717631 NUU05_RS05080 WP_011681210.1 970468..971349(+) (endA) [Streptococcus thermophilus strain TH-4]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=717631 NUU05_RS05080 WP_011681210.1 970468..971349(+) (endA) [Streptococcus thermophilus strain TH-4]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594