Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NUU05_RS02920 Genome accession   NZ_CP102538
Coordinates   531942..532673 (+) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain TH-4     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 526942..537673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUU05_RS02890 (NUU05_02875) - 527067..529166 (+) 2100 WP_011681535.1 ATP-dependent Clp protease ATP-binding subunit -
  NUU05_RS02895 (NUU05_02880) - 529584..529709 (+) 126 WP_011681534.1 hypothetical protein -
  NUU05_RS02900 (NUU05_02885) - 529728..530363 (+) 636 WP_011681533.1 DUF4230 domain-containing protein -
  NUU05_RS02905 (NUU05_02890) - 530433..531110 (+) 678 WP_011681532.1 hypothetical protein -
  NUU05_RS02910 (NUU05_02895) - 531162..531461 (-) 300 WP_011681531.1 hypothetical protein -
  NUU05_RS02915 (NUU05_02900) - 531458..531877 (-) 420 WP_011681530.1 HIT family protein -
  NUU05_RS02920 (NUU05_02905) pptA 531942..532673 (+) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  NUU05_RS02925 (NUU05_02910) pptB 532673..533707 (+) 1035 WP_024703983.1 ABC transporter permease Regulator
  NUU05_RS02930 (NUU05_02915) ccrZ 533765..534556 (+) 792 WP_002951667.1 cell cycle regulator CcrZ -
  NUU05_RS02935 (NUU05_02920) trmB 534566..535207 (+) 642 WP_002947526.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NUU05_RS02945 (NUU05_02930) - 535443..536624 (-) 1182 WP_002951656.1 NAD(P)/FAD-dependent oxidoreductase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=717619 NUU05_RS02920 WP_002951673.1 531942..532673(+) (pptA) [Streptococcus thermophilus strain TH-4]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=717619 NUU05_RS02920 WP_002951673.1 531942..532673(+) (pptA) [Streptococcus thermophilus strain TH-4]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCAACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTGAATCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971