Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   MGGS36055_RS09970 Genome accession   NZ_CP117286
Coordinates   1998218..1999927 (-) Length   569 a.a.
NCBI ID   WP_015017436.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1993218..2004927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGGS36055_RS09950 (MGGS36055_04014) radA 1993550..1994911 (-) 1362 WP_110408183.1 DNA repair protein RadA Machinery gene
  MGGS36055_RS09955 (MGGS36055_04016) - 1994994..1995440 (-) 447 WP_042357999.1 dUTP diphosphatase -
  MGGS36055_RS09960 (MGGS36055_04018) - 1995548..1996315 (-) 768 WP_014612596.1 epoxyqueuosine reductase QueH -
  MGGS36055_RS09965 (MGGS36055_04020) - 1996434..1998218 (-) 1785 WP_015017435.1 ABC transporter ATP-binding protein -
  MGGS36055_RS09970 (MGGS36055_04022) rcrP 1998218..1999927 (-) 1710 WP_015017436.1 ABC transporter ATP-binding protein Regulator
  MGGS36055_RS09975 (MGGS36055_04024) rcrR 1999920..2000369 (-) 450 WP_003053369.1 MarR family transcriptional regulator Regulator
  MGGS36055_RS09980 (MGGS36055_04026) - 2000570..2001586 (+) 1017 WP_003053365.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  MGGS36055_RS09985 (MGGS36055_04028) hasC 2001618..2002520 (+) 903 WP_003061497.1 UTP--glucose-1-phosphate uridylyltransferase HasC -
  MGGS36055_RS09990 (MGGS36055_04030) - 2002701..2003327 (+) 627 WP_012767578.1 DUF6198 family protein -
  MGGS36055_RS09995 (MGGS36055_04032) - 2003504..2004178 (-) 675 WP_003053389.1 rhomboid family intramembrane serine protease -
  MGGS36055_RS10000 (MGGS36055_04034) - 2004175..2004702 (-) 528 WP_012767579.1 5-formyltetrahydrofolate cyclo-ligase -

Sequence

Protein


Download         Length: 569 a.a.        Molecular weight: 63315.95 Da        Isoelectric Point: 5.6522

>NTDB_id=717548 MGGS36055_RS09970 WP_015017436.1 1998218..1999927(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
MLKEAILRYKWYALGSLIMIIGVVASSLLQPHYLKDVLSAVIQNNQDKIYNVGILLLIIALMGLIAGAVNTILAAKIAQG
VSADIREKTFRKIQSFSYANVEAFNAGNLVVRMTNDINQIQNLVMMLFQVLFRLPILFIGAFIMAVQTLPDLWWVIVLMV
ILIGLIMALVMSQMGPRFGKFQKLMDKINRIAKENLRGVRVVKSFVQEREQYAKFKETSNELLDLNLFIGYGFSLMQPAL
MLVSYLAVYVSIYMVSGMVETDPTVIGNIASFMTYMMQIMFSIIMVGFMGMQASRAFVSIGRLKEVLDTESTMTFDTEQE
EEVSGSIVFEDVSFTYPNDDEPTLRHISFRIEPGQMVGVVGATGAGKSTLAQLIPRLFDPQEGQILLGGKPIKSLGQATL
RQTVSIVLQKAILFSGTIADNLRQGSATADDYAMERAARIAQAKEFIDRMDDRYESQVEERGNNFSGGQKQRMSIARGVI
NQPKILVLDDSTSALDAKSERLVQEALNKELKETTTVIIAQKISSVVKADKILVLDQGQLIGEGTHAELVANNAIYREIY
ETQKGKEED

Nucleotide


Download         Length: 1710 bp        

>NTDB_id=717548 MGGS36055_RS09970 WP_015017436.1 1998218..1999927(-) (rcrP) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
ATGCTTAAAGAAGCGATTTTGCGTTACAAATGGTACGCATTGGGCTCGCTCATCATGATTATTGGGGTGGTAGCGAGCAG
TTTGCTTCAGCCTCATTATTTAAAAGATGTGCTGAGTGCTGTTATTCAAAATAACCAAGATAAGATTTACAATGTGGGGA
TATTGTTGCTTATCATTGCGCTGATGGGATTGATTGCAGGGGCAGTTAATACTATTTTAGCTGCTAAGATTGCTCAAGGG
GTCTCAGCGGATATTCGTGAGAAGACCTTCCGAAAAATTCAGAGTTTTTCTTATGCCAATGTAGAAGCTTTCAATGCTGG
GAACCTCGTGGTTCGGATGACCAATGATATTAATCAAATTCAAAATTTGGTAATGATGCTGTTTCAAGTGCTTTTTCGTC
TGCCGATTCTCTTTATTGGAGCTTTTATCATGGCGGTGCAGACCCTACCTGACTTGTGGTGGGTGATTGTGCTGATGGTT
ATTTTAATTGGTCTTATCATGGCTTTGGTCATGAGTCAGATGGGCCCACGTTTTGGGAAATTCCAAAAGTTGATGGACAA
GATCAATCGAATTGCTAAGGAAAATCTTCGTGGCGTGCGTGTGGTTAAATCTTTTGTGCAAGAACGGGAACAATATGCCA
AATTTAAAGAAACGTCCAATGAACTATTAGATTTGAATCTCTTTATCGGCTACGGTTTTTCGTTGATGCAACCTGCTTTG
ATGTTGGTATCTTATCTGGCAGTGTACGTGTCCATCTATATGGTTTCAGGCATGGTTGAAACAGATCCTACCGTTATTGG
GAATATTGCTTCTTTCATGACTTATATGATGCAAATCATGTTTTCAATTATCATGGTTGGCTTTATGGGCATGCAAGCAA
GTCGTGCCTTTGTCTCTATTGGTCGTCTCAAAGAGGTGCTAGATACTGAGTCAACCATGACCTTTGACACCGAGCAAGAA
GAAGAGGTTTCAGGTAGTATTGTCTTTGAGGATGTCAGCTTTACTTATCCTAATGATGATGAGCCGACCTTACGCCATAT
TTCCTTTAGGATTGAACCTGGTCAAATGGTTGGCGTTGTCGGTGCTACTGGTGCTGGGAAGTCTACACTGGCACAGCTTA
TTCCGCGCTTGTTTGACCCGCAAGAAGGTCAAATCTTGCTGGGAGGCAAACCGATTAAATCCTTGGGCCAAGCGACTCTT
CGTCAAACGGTTTCTATCGTGTTGCAAAAGGCTATTCTTTTTTCGGGAACCATTGCAGACAATCTCCGTCAAGGATCAGC
AACTGCAGATGATTATGCCATGGAACGAGCAGCGCGTATTGCTCAAGCCAAAGAATTTATCGATCGTATGGATGACCGCT
ATGAAAGCCAAGTGGAAGAACGGGGCAATAACTTCTCTGGTGGTCAAAAACAACGAATGTCGATTGCGCGTGGTGTTATT
AACCAACCTAAGATTCTTGTATTGGATGACTCAACATCGGCTCTGGATGCCAAGTCAGAAAGATTAGTTCAAGAAGCCTT
GAATAAAGAGTTGAAAGAGACCACCACAGTGATCATTGCCCAAAAAATTTCGTCAGTGGTAAAGGCTGATAAGATTTTAG
TTCTCGATCAGGGCCAACTGATTGGCGAAGGAACTCATGCTGAGTTGGTAGCTAATAATGCGATTTATCGTGAAATTTAT
GAGACCCAAAAAGGGAAGGAGGAAGACTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-282)

ABC transporter (ABC_tran)

(344-493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

34.746

100

0.36