Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   MGCS36089_RS06340 Genome accession   NZ_CP117284
Coordinates   1258879..1259358 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1253879..1264358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGCS36089_RS06320 (MGCS36089_02594) - 1254178..1254519 (-) 342 WP_003054176.1 hypothetical protein -
  MGCS36089_RS06325 (MGCS36089_02596) - 1254697..1256349 (+) 1653 WP_065354957.1 Rqc2 family fibronectin-binding protein -
  MGCS36089_RS06330 (MGCS36089_02598) - 1256412..1257659 (-) 1248 WP_084916566.1 tetratricopeptide repeat protein -
  MGCS36089_RS06335 (MGCS36089_02600) - 1257649..1258830 (-) 1182 WP_065354958.1 AI-2E family transporter -
  MGCS36089_RS06340 (MGCS36089_02602) mutX 1258879..1259358 (-) 480 WP_003058929.1 NUDIX hydrolase Machinery gene
  MGCS36089_RS06345 (MGCS36089_02604) - 1259554..1259745 (+) 192 WP_003058922.1 hypothetical protein -
  MGCS36089_RS06350 (MGCS36089_02606) - 1259833..1260558 (-) 726 WP_022554827.1 CPBP family intramembrane glutamic endopeptidase -
  MGCS36089_RS06355 (MGCS36089_02608) rfbB 1260747..1261790 (-) 1044 WP_044565428.1 dTDP-glucose 4,6-dehydratase -
  MGCS36089_RS06360 (MGCS36089_02610) - 1262034..1262627 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  MGCS36089_RS06365 (MGCS36089_02612) rfbA 1262627..1263496 (-) 870 WP_046177098.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=717307 MGCS36089_RS06340 WP_003058929.1 1258879..1259358(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=717307 MGCS36089_RS06340 WP_003058929.1 1258879..1259358(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36089]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686