Detailed information NTG0717240

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NTJ56_RS16030
• Genome accession: NZ_CP102482
• Coordinates: 3363224..3364378 (+)
• Length: 384 a.a.
• NCBI ID: WP_226117179.1
• Uniprot ID: -
• Organism: Burkholderia contaminans strain DM32
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3358224..3369378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NTJ56_RS16000 (NTJ56_16000)	-	3358866..3359471 (+)	606	WP_039346059.1	50S ribosomal protein L25/general stress protein Ctc	-
NTJ56_RS16005 (NTJ56_16005)	pth	3359593..3360192 (+)	600	WP_006477776.1	aminoacyl-tRNA hydrolase	-
NTJ56_RS16010 (NTJ56_16010)	hisC	3360307..3361374 (+)	1068	WP_226221308.1	histidinol-phosphate transaminase	-
NTJ56_RS16015 (NTJ56_16015)	-	3361458..3361724 (-)	267	WP_226117195.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NTJ56_RS16020 (NTJ56_16020)	coaD	3361784..3362281 (-)	498	WP_039346084.1	pantetheine-phosphate adenylyltransferase	-
NTJ56_RS16025 (NTJ56_16025)	rsmD	3362393..3363007 (-)	615	WP_039346086.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NTJ56_RS16030 (NTJ56_16030)	pilA	3363224..3364378 (+)	1155	WP_226117179.1	signal recognition particle-docking protein FtsY	Machinery gene
NTJ56_RS16035 (NTJ56_16035)	maiA	3364464..3365108 (-)	645	WP_047852678.1	maleylacetoacetate isomerase	-
NTJ56_RS16040 (NTJ56_16040)	ybiB	3365297..3366271 (+)	975	WP_226117177.1	DNA-binding protein YbiB	-
NTJ56_RS16045 (NTJ56_16045)	leuA	3366652..3368298 (+)	1647	WP_226221389.1	2-isopropylmalate synthase	-
NTJ56_RS16050 (NTJ56_16050)	-	3368443..3368826 (-)	384	WP_039346091.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40972.90 Da
• Isoelectric Point: 4.7979

>NTDB_id=717240 NTJ56_RS16030 WP_226117179.1 3363224..3364378(+) (pilA) [Burkholderia contaminans strain DM32]
MFSFFKRFKKTQEPDPAESQSTDAQQTDEPSDAPAVEAPPVADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=717240 NTJ56_RS16030 WP_226117179.1 3363224..3364378(+) (pilA) [Burkholderia contaminans strain DM32]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGACCGACGCGCAGCAAAC
GGACGAGCCGTCCGACGCGCCCGCGGTCGAGGCCCCGCCTGTGGCCGACGTGCCGCAAGCGCCCGCACAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGATGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGTGTAG
ACGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACCGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCAGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCTGCGATCGCGCGTCAGCGTCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTTGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581