Detailed information NTG0717168

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NUJ29_RS16230
• Genome accession: NZ_CP102462
• Coordinates: 3434954..3436108 (+)
• Length: 384 a.a.
• NCBI ID: WP_039346088.1
• Uniprot ID: -
• Organism: Burkholderia contaminans strain NML151013
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3429954..3441108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NUJ29_RS16200 (NUJ29_16200)	-	3430597..3431202 (+)	606	WP_039346059.1	50S ribosomal protein L25/general stress protein Ctc	-
NUJ29_RS16205 (NUJ29_16205)	pth	3431324..3431923 (+)	600	WP_006477776.1	aminoacyl-tRNA hydrolase	-
NUJ29_RS16210 (NUJ29_16210)	hisC	3432038..3433105 (+)	1068	WP_105816780.1	histidinol-phosphate transaminase	-
NUJ29_RS16215 (NUJ29_16215)	-	3433189..3433455 (-)	267	WP_039346082.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NUJ29_RS16220 (NUJ29_16220)	coaD	3433515..3434012 (-)	498	WP_039346084.1	pantetheine-phosphate adenylyltransferase	-
NUJ29_RS16225 (NUJ29_16225)	rsmD	3434124..3434738 (-)	615	WP_039346086.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NUJ29_RS16230 (NUJ29_16230)	pilA	3434954..3436108 (+)	1155	WP_039346088.1	signal recognition particle-docking protein FtsY	Machinery gene
NUJ29_RS16235 (NUJ29_16235)	maiA	3436194..3436838 (-)	645	WP_047852678.1	maleylacetoacetate isomerase	-
NUJ29_RS16240 (NUJ29_16240)	ybiB	3437027..3438001 (+)	975	WP_039346089.1	DNA-binding protein YbiB	-
NUJ29_RS16245 (NUJ29_16245)	leuA	3438382..3440028 (+)	1647	WP_105816779.1	2-isopropylmalate synthase	-
NUJ29_RS16250 (NUJ29_16250)	-	3440172..3440555 (-)	384	WP_039346091.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 384 a.a.
• Molecular weight: 40942.88 Da
• Isoelectric Point: 4.7979

>NTDB_id=717168 NUJ29_RS16230 WP_039346088.1 3434954..3436108(+) (pilA) [Burkholderia contaminans strain NML151013]
MFSFFKRFKKTQEPDPAESQSADAQQTDEPSDAPAVEAPPVADVPQAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVPPP
LQDATAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTGRLTDPQQVKA
ALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNV
TVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALTQ
VKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1155 bp

>NTDB_id=717168 NUJ29_RS16230 WP_039346088.1 3434954..3436108(+) (pilA) [Burkholderia contaminans strain NML151013]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAAC
GGACGAGCCGTCCGACGCGCCCGCGGTCGAGGCCCCGCCTGTGGCCGACGTGCCGCAAGCGCCCGCACAACCGGCCGCGC
CGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCGCCG
CTGCAGGACGCCACCGCGAAGAAATCGTGGCTTGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCACCGG
CGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCGTCG
ACGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACCGGCCGCCTGACCGACCCGCAGCAGGTGAAGGCC
GCGCTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGTGAT
GATGATCACCGGCGTGAACGGCGCCGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACCAGT
CGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCAGTCTGGGGCGAGCGCAACAACGTG
ACGGTCGTGCAGCAGGAAAGCGGTGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCAGCGCGCGCGCGCAAGATCGA
CGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTCCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCGTGA
TCTCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAG
GTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATTCT
CGCTGCGATCGCGCGTCAGCGTCCGGTGCCGGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGTTCA
GCGCGGTCGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (102-164)

• SRP54-type protein, GTPase domain (SRP54) (185-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.606	100	0.581