Detailed information NTG0716950

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: NR793_RS05805
• Genome accession: NZ_CP102433
• Coordinates: 1293770..1294867 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain RMDVP1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1288770..1299867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NR793_RS05790 (NR793_05810)	-	1289435..1290490 (-)	1056	WP_005477158.1	HlyD family secretion protein	-
NR793_RS05795 (NR793_05815)	-	1290528..1290983 (-)	456	WP_005477342.1	MarR family transcriptional regulator	-
NR793_RS05800 (NR793_05820)	luxQ	1291194..1293770 (-)	2577	WP_005477121.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
NR793_RS05805 (NR793_05825)	luxP	1293770..1294867 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
NR793_RS05810 (NR793_05830)	-	1295220..1295540 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
NR793_RS05815 (NR793_05835)	-	1295537..1296187 (-)	651	WP_005477153.1	YceH family protein	-
NR793_RS05820 (NR793_05840)	-	1296364..1296579 (-)	216	WP_005477197.1	hypothetical protein	-
NR793_RS05825 (NR793_05845)	-	1296907..1297221 (+)	315	WP_005453573.1	DUF496 family protein	-
NR793_RS05830 (NR793_05850)	-	1297344..1298681 (+)	1338	WP_005477179.1	MATE family efflux transporter	-
NR793_RS05835 (NR793_05855)	-	1298752..1299729 (-)	978	WP_005477354.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=716950 NR793_RS05805 WP_005463467.1 1293770..1294867(-) (luxP) [Vibrio parahaemolyticus strain RMDVP1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=716950 NR793_RS05805 WP_005463467.1 1293770..1294867(-) (luxP) [Vibrio parahaemolyticus strain RMDVP1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCTGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTAAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACATGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGAGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCGCTGTCTGAACTTGGCCGTGAAGACGTTATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATCAAATGGGATTTGGAAGGCAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644