Detailed information NTG0716715

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NL423_RS24050
• Genome accession: NZ_CP117049
• Coordinates: 4738054..4739079 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MLI106K2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4733054..4744079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NL423_RS24030 (NL423_024080)	metJ	4734115..4734432 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NL423_RS24035 (NL423_024085)	yiiX	4734616..4735224 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
NL423_RS24040 (NL423_024090)	rpmE	4735285..4735497 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NL423_RS24045 (NL423_024095)	priA	4735700..4737898 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
NL423_RS24050 (NL423_024100)	cytR	4738054..4739079 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NL423_RS24055 (NL423_024105)	ftsN	4739171..4740130 (+)	960	WP_000068828.1	cell division protein FtsN	-
NL423_RS24060 (NL423_024110)	hslV	4740223..4740753 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NL423_RS24065 (NL423_024115)	hslU	4740763..4742094 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NL423_RS24070 (NL423_024120)	menA	4742161..4743087 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NL423_RS24075 (NL423_024125)	rraA	4743180..4743665 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NL423_RS24080 (NL423_024130)	zapB	4743750..4743995 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=716715 NL423_RS24050 WP_000644904.1 4738054..4739079(+) (cytR) [Escherichia coli strain MLI106K2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=716715 NL423_RS24050 WP_000644904.1 4738054..4739079(+) (cytR) [Escherichia coli strain MLI106K2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628