Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JMUB1273_RS13605 Genome accession   NZ_AP018922
Coordinates   2627462..2628127 (-) Length   221 a.a.
NCBI ID   WP_119267469.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JMUB1273     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2622462..2633127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JMUB1273_RS13585 - 2622930..2623043 (-) 114 WP_011447078.1 hypothetical protein -
  JMUB1273_RS13590 (JMUB1273_2538) - 2623704..2625704 (-) 2001 WP_000776738.1 ABC transporter permease -
  JMUB1273_RS13595 (JMUB1273_2539) - 2625701..2626456 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  JMUB1273_RS13600 (JMUB1273_2540) braS 2626564..2627451 (-) 888 WP_000143416.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  JMUB1273_RS13605 (JMUB1273_2541) braR 2627462..2628127 (-) 666 WP_119267469.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  JMUB1273_RS13610 (JMUB1273_2542) - 2628153..2628353 (-) 201 WP_000604728.1 hypothetical protein -
  JMUB1273_RS13615 (JMUB1273_2543) - 2628551..2629975 (+) 1425 WP_000953744.1 alkaline phosphatase -
  JMUB1273_RS14345 - 2630035..2630136 (-) 102 WP_000731972.1 SE2200 family small protein -
  JMUB1273_RS13625 (JMUB1273_2544) - 2630258..2630713 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  JMUB1273_RS13630 (JMUB1273_2545) - 2630958..2631719 (-) 762 WP_119267470.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25420.51 Da        Isoelectric Point: 4.6846

>NTDB_id=71657 JMUB1273_RS13605 WP_119267469.1 2627462..2628127(-) (braR) [Staphylococcus aureus strain JMUB1273]
MKILIVEDDFVIAESLVSELKKWNYGVIVVEQFDDILSIFNQNQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=71657 JMUB1273_RS13605 WP_119267469.1 2627462..2628127(-) (braR) [Staphylococcus aureus strain JMUB1273]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAGAGTTTAGTATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAAAATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment