Detailed information NTG0716429

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: PO908_RS05225
• Genome accession: NZ_CP117042
• Coordinates: 991582..992694 (+)
• Length: 370 a.a.
• NCBI ID: WP_003024631.1
• Uniprot ID: A0A0P0N8U3
• Organism: Streptococcus anginosus strain CGMH_KH1
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 986582..997694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PO908_RS05205 (PO908_05185)	-	988445..988783 (+)	339	WP_003024641.1	ATP cone domain-containing protein	-
PO908_RS05210 (PO908_05190)	rpsU	988980..989156 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
PO908_RS05215 (PO908_05195)	mscL	989269..989649 (-)	381	WP_003024637.1	large conductance mechanosensitive channel protein MscL	-
PO908_RS05220 (PO908_05200)	dnaG	989804..991579 (+)	1776	WP_282187182.1	DNA primase	-
PO908_RS05225 (PO908_05205)	rpoS	991582..992694 (+)	1113	WP_003024631.1	RNA polymerase sigma factor RpoD	Regulator
PO908_RS05230 (PO908_05210)	-	992713..993042 (+)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
PO908_RS05235 (PO908_05215)	brnQ	993190..994518 (+)	1329	WP_021001660.1	branched-chain amino acid transport system II carrier protein	-
PO908_RS05240 (PO908_05220)	ccdA2	994656..995366 (+)	711	WP_003024626.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
PO908_RS05245 (PO908_05225)	-	995380..995943 (+)	564	WP_003024623.1	redoxin domain-containing protein	-
PO908_RS05250 (PO908_05230)	msrB	995956..997074 (+)	1119	WP_041784110.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42439.09 Da
• Isoelectric Point: 4.4643

>NTDB_id=716429 PO908_RS05225 WP_003024631.1 991582..992694(+) (rpoS) [Streptococcus anginosus strain CGMH_KH1]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=716429 PO908_RS05225 WP_003024631.1 991582..992694(+) (rpoS) [Streptococcus anginosus strain CGMH_KH1]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCTAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCCACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAGGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTACTACGTTTGCGTTTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAGTCGTAGCAAGCCACTTCGTGACTTTATTGAAGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: A0A0P0N8U3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37