Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   PO908_RS05050 Genome accession   NZ_CP117042
Coordinates   951429..951899 (+) Length   156 a.a.
NCBI ID   WP_021001634.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CGMH_KH1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 946429..956899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PO908_RS05035 (PO908_05015) - 948534..949100 (+) 567 WP_021001633.1 DUF805 domain-containing protein -
  PO908_RS05040 (PO908_05020) - 949731..950717 (+) 987 WP_003024723.1 Gfo/Idh/MocA family protein -
  PO908_RS05045 (PO908_05025) - 950739..951392 (+) 654 WP_003024719.1 uracil-DNA glycosylase -
  PO908_RS05050 (PO908_05030) mutX 951429..951899 (+) 471 WP_021001634.1 8-oxo-dGTP diphosphatase Machinery gene
  PO908_RS05055 (PO908_05035) - 951912..953189 (+) 1278 WP_021001635.1 dihydroorotase -
  PO908_RS05060 (PO908_05040) metK 953455..954645 (+) 1191 WP_021001636.1 methionine adenosyltransferase -
  PO908_RS05065 (PO908_05045) - 954842..956101 (+) 1260 WP_021001637.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  PO908_RS05070 (PO908_05050) - 956180..956731 (+) 552 WP_021001638.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18006.52 Da        Isoelectric Point: 4.9099

>NTDB_id=716428 PO908_RS05050 WP_021001634.1 951429..951899(+) (mutX) [Streptococcus anginosus strain CGMH_KH1]
MVKLATICYIDNGKEFLLLHRNKKPNDVHAGKWIGVGGKLEKGETPQECAVREIFEETGLRVNKPVLKGIITFPDFIPNH
DWYTYVFKVTEFEGGLIDCDEGTLEWVPYEQVLSKPTWEGDHTFLSWILEDKPFFSAKFSYKGEKLVESHVDFYGE

Nucleotide


Download         Length: 471 bp        

>NTDB_id=716428 PO908_RS05050 WP_021001634.1 951429..951899(+) (mutX) [Streptococcus anginosus strain CGMH_KH1]
ATGGTTAAGTTAGCAACGATTTGCTATATTGACAACGGCAAAGAATTTTTATTGCTACATCGAAATAAAAAGCCTAATGA
TGTTCATGCTGGTAAGTGGATTGGTGTTGGGGGTAAATTAGAGAAAGGTGAAACGCCGCAGGAGTGCGCTGTAAGAGAAA
TCTTTGAAGAAACAGGTTTGCGGGTCAATAAGCCAGTATTAAAAGGTATTATCACGTTTCCAGATTTTATACCTAACCAT
GATTGGTATACCTATGTATTTAAAGTGACGGAGTTTGAGGGAGGCTTGATTGACTGCGATGAGGGGACTTTGGAATGGGT
GCCTTATGAACAAGTTTTGTCCAAACCAACTTGGGAGGGAGATCATACGTTTCTATCTTGGATTTTAGAAGATAAACCAT
TCTTCTCGGCTAAATTTTCTTACAAAGGAGAGAAGTTGGTGGAGAGTCATGTTGATTTTTATGGAGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

80.519

98.718

0.795