Detailed information NTG0716371

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NRF13_RS17300
• Genome accession: NZ_CP102350
• Coordinates: 3442056..3443219 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain PMC206
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3437056..3448219

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NRF13_RS17270 (NRF13_17270)	-	3437321..3437740 (-)	420	WP_058906393.1	TIGR03826 family flagellar region protein	-
NRF13_RS17275 (NRF13_17275)	comFC	3437814..3438503 (-)	690	WP_196479391.1	ComF family protein	Machinery gene
NRF13_RS17280 (NRF13_17280)	-	3438509..3438793 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
NRF13_RS17285 (NRF13_17285)	comFA	3438851..3440236 (-)	1386	WP_058906395.1	DEAD/DEAH box helicase	Machinery gene
NRF13_RS17290 (NRF13_17290)	-	3440344..3441192 (-)	849	WP_058906396.1	DegV family protein	-
NRF13_RS17295 (NRF13_17295)	degU	3441290..3441979 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NRF13_RS17300 (NRF13_17300)	degS	3442056..3443219 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
NRF13_RS17305 (NRF13_17305)	-	3443442..3444089 (+)	648	WP_003151384.1	YigZ family protein	-
NRF13_RS17310 (NRF13_17310)	-	3444094..3445308 (+)	1215	WP_003151383.1	LCP family protein	-
NRF13_RS17315 (NRF13_17315)	-	3445398..3446474 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
NRF13_RS17320 (NRF13_17320)	-	3446607..3447803 (-)	1197	WP_058906397.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=716371 NRF13_RS17300 WP_003151385.1 3442056..3443219(-) (degS) [Bacillus velezensis strain PMC206]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=716371 NRF13_RS17300 WP_003151385.1 3442056..3443219(-) (degS) [Bacillus velezensis strain PMC206]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948