Detailed information NTG0716347

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: PPW95_RS02550
• Genome accession: NZ_CP117038
• Coordinates: 593028..595604 (-)
• Length: 858 a.a.
• NCBI ID: WP_025521028.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain VP220218
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 588028..600604

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PPW95_RS02525 (PPW95_02525)	-	588508..589434 (+)	927	WP_031856090.1	DMT family transporter	-
PPW95_RS02530 (PPW95_02530)	-	589530..590192 (+)	663	WP_005499292.1	flagellar brake protein	-
PPW95_RS02535 (PPW95_02535)	-	590218..591255 (-)	1038	WP_031827336.1	DUF2955 domain-containing protein	-
PPW95_RS02540 (PPW95_02540)	-	591268..592323 (-)	1056	WP_025623626.1	HlyD family secretion protein	-
PPW95_RS02545 (PPW95_02545)	-	592361..592816 (-)	456	WP_025525184.1	MarR family transcriptional regulator	-
PPW95_RS02550 (PPW95_02550)	luxQ	593028..595604 (-)	2577	WP_025521028.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
PPW95_RS02555 (PPW95_02555)	luxP	595604..596701 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
PPW95_RS02560 (PPW95_02560)	-	597053..597373 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
PPW95_RS02565 (PPW95_02565)	-	597370..598020 (-)	651	WP_005499314.1	YceH family protein	-
PPW95_RS02570 (PPW95_02570)	-	598197..598412 (-)	216	WP_005477197.1	hypothetical protein	-
PPW95_RS02575 (PPW95_02575)	-	598740..599054 (+)	315	WP_005453573.1	DUF496 family protein	-
PPW95_RS02580 (PPW95_02580)	-	599177..600514 (+)	1338	WP_031856089.1	MATE family efflux transporter	-

Sequence

Protein

• Length: 858 a.a.
• Molecular weight: 96788.68 Da
• Isoelectric Point: 4.9528

>NTDB_id=716347 PPW95_RS02550 WP_025521028.1 593028..595604(-) (luxQ) [Vibrio parahaemolyticus strain VP220218]
MTITSKLKKRRSLSTLITKIIILVLAPIILGIFVQSYYFSKQIIWQEVDRTKQQTSALILNIFESHFAAIQIHHDSNSKS
DVILDFYSERNEEALNYFFLSIDQSDPSHTPEFRFLTDHQGIIWDDGNAHFYGINDSMLDGLTSKVTFSNNWYYVTSITS
MGARHLLLRRVPVLEPKTGEVMGYSYNAVVLDNNFALMEKLKNEGNVDNVVLVANDIPVASSLAGDESYKIFDVLKRKET
QKKLDQLLIIQTPIEVNAAITNLKLLTVQDNQSVVTLQIQHFLAMLASVIGMIMIALMTKEWIENRVVEELGSLMSYTRS
AREEKGFERFGGSDIEEFDHIGSTLESTFEELEAQKRSFRDLFNFALSPIMVWSEAGVLIQINPAARKELVIENDIETMH
PVFKGFKDKLVPHLRMAAQGATLTGVNVPIGDKVFRWNLSPIRVDGDISGIIVQGQDITTLIEAEKQSNLARREAEKSAQ
ARADFLAKMSHEIRTPINGILGVAQLLKDSVEAEEQKNQIDVLRHSGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFADT
MRTLENIYRPICKNKGVELVIENQLDGNVEIFTDQVRLNQILFNLVSNAVKFTPSGCVRLHAELEQFYGADNSVLVVEIS
DTGIGIESDKLDEMFEPFVQEEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQGTTFVVTLPVKDRERVLAPLDS
SQRVKPAELFDESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLKDHSYDLILMDNQLPHLGGIETTKEIR
QNLKLGTPIYACTADTAQETSDAFMEAGANYVLLKPIKENALHEAFVDFKQRFLIERT

Nucleotide

• Length: 2577 bp

>NTDB_id=716347 PPW95_RS02550 WP_025521028.1 593028..595604(-) (luxQ) [Vibrio parahaemolyticus strain VP220218]
ATGACAATTACATCAAAGCTAAAAAAGCGTCGATCGCTGTCGACGCTTATAACTAAAATTATTATTCTCGTTCTTGCTCC
GATCATTTTAGGCATTTTCGTTCAGAGTTATTACTTCTCCAAACAGATCATTTGGCAGGAGGTCGACCGAACCAAGCAGC
AAACGTCTGCGTTGATTCTGAATATTTTTGAAAGTCATTTTGCAGCGATTCAGATCCATCACGACAGCAATTCGAAAAGT
GATGTGATTTTGGATTTTTACTCGGAGCGAAATGAAGAAGCCTTAAATTACTTCTTTCTCAGCATTGATCAGAGTGATCC
TTCGCACACACCTGAATTTCGTTTTCTCACCGACCATCAAGGTATTATTTGGGACGATGGGAACGCGCATTTTTATGGTA
TCAACGATTCAATGCTGGACGGCCTGACTAGCAAAGTTACGTTCAGTAATAATTGGTATTACGTCACATCAATCACGTCA
ATGGGTGCTCGTCACTTGTTGCTACGCCGTGTTCCTGTGTTAGAGCCGAAAACGGGCGAAGTGATGGGGTATTCGTACAA
CGCGGTCGTCTTGGATAATAACTTCGCCTTGATGGAAAAGTTAAAAAACGAAGGCAACGTCGACAATGTTGTGCTGGTGG
CGAACGACATTCCTGTAGCAAGTTCACTGGCGGGGGATGAGTCATACAAAATCTTCGATGTGTTGAAACGCAAAGAGACC
CAGAAGAAGTTAGATCAGTTGTTGATCATCCAAACACCGATTGAAGTGAACGCAGCCATCACCAACTTGAAGTTACTTAC
CGTGCAAGACAACCAGAGTGTTGTTACGCTGCAAATTCAACACTTTTTGGCGATGTTAGCATCTGTTATTGGCATGATTA
TGATTGCGCTGATGACCAAAGAGTGGATTGAAAACCGAGTTGTGGAAGAGCTGGGTTCGCTCATGTCTTACACGCGTTCT
GCTCGCGAAGAAAAAGGCTTTGAGCGTTTTGGTGGGTCGGATATTGAAGAGTTTGACCACATTGGTTCGACGCTGGAAAG
CACGTTTGAAGAATTAGAAGCTCAGAAGCGATCGTTTCGAGACCTGTTTAACTTCGCGTTATCGCCAATCATGGTGTGGT
CAGAAGCGGGCGTGCTGATCCAAATCAACCCCGCAGCTCGCAAAGAACTGGTTATCGAAAATGACATCGAAACCATGCAT
CCTGTATTTAAAGGATTCAAAGACAAACTGGTACCACATTTAAGAATGGCAGCGCAGGGCGCGACACTGACGGGAGTGAA
CGTGCCGATTGGTGACAAAGTCTTTCGTTGGAACTTATCGCCAATTCGTGTCGATGGTGATATCAGCGGCATCATTGTCC
AAGGGCAAGATATTACAACGCTGATCGAAGCTGAAAAGCAAAGTAACTTAGCACGCAGAGAAGCCGAAAAGTCCGCGCAA
GCGCGAGCTGACTTCTTGGCTAAAATGAGCCATGAAATTCGCACACCAATTAATGGTATTTTGGGTGTTGCGCAGCTACT
CAAAGATTCCGTGGAAGCGGAAGAGCAGAAGAACCAAATCGATGTTCTTCGCCACAGTGGTGAGCACTTACTTGCTGTAT
TGAATGATATTTTGGACTTCTCAAAGATTGAACAAGGCAAGTTCAATATCCAAAAACATCCTTTCTCCTTCGCTGATACC
ATGCGAACGCTAGAAAACATCTATCGCCCTATTTGTAAAAACAAAGGGGTTGAACTTGTCATTGAAAACCAGCTTGATGG
CAATGTAGAGATTTTCACCGACCAAGTTCGTCTGAATCAAATTCTGTTTAATTTAGTCAGTAACGCGGTGAAGTTCACGC
CATCGGGCTGCGTGCGTTTACATGCCGAGTTAGAGCAGTTTTATGGCGCAGACAATAGTGTGCTAGTGGTTGAAATCAGC
GATACGGGTATCGGTATTGAGTCCGACAAGTTGGATGAAATGTTCGAACCTTTTGTTCAAGAAGAAGCGACCACAACTCG
CGAATACGGTGGCAGTGGACTTGGTTTGACCATCGTGAAAAACTTGGTCGATATGCTCGACGGGGATGTACAAGTTCGCA
GTCAAAAAGGGCAAGGAACCACATTTGTTGTTACGCTGCCAGTAAAGGATCGTGAGCGAGTTCTGGCTCCGTTGGATTCG
AGCCAACGCGTAAAACCTGCAGAGTTGTTTGATGAAAGTCTGAAAGTGTTGCTGGTGGAAGATAACCATACTAACGCCTT
TATTCTTAAAGCGTTTTGTACCAAATACAAGATGCAGGTTGATTGGGCGAAAGATGGGCTAGAAGCCATGGAGTTCTTAA
AAGATCACTCTTATGATTTGATTTTGATGGATAACCAACTTCCGCATCTTGGTGGCATCGAAACCACGAAAGAGATTCGT
CAAAACTTGAAATTGGGGACGCCAATTTACGCCTGCACCGCCGACACTGCGCAAGAAACCAGTGATGCATTTATGGAAGC
AGGCGCGAACTATGTTTTGCTGAAACCCATTAAAGAAAATGCACTCCACGAGGCTTTTGTTGACTTCAAGCAGCGCTTCT
TGATTGAACGGACATAG

Domains

Predicted by InterProScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (482-546)

• Response regulator receiver domain (Response_reg) (736-845)

• LuxQ, periplasmic (LuxQ-periplasm) (40-277)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (593-708)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	45.809	98.718	0.452