Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NRF13_RS01890 Genome accession   NZ_CP102350
Coordinates   345057..345221 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain PMC206     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 340057..350221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRF13_RS01885 (NRF13_01885) srfAB 341948..345040 (+) 3093 Protein_314 surfactin non-ribosomal peptide synthetase SrfAB -
  NRF13_RS01890 (NRF13_01890) comS 345057..345221 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=716310 NRF13_RS01890 WP_269465305.1 345057..345221(+) (comS) [Bacillus velezensis strain PMC206]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=716310 NRF13_RS01890 WP_269465305.1 345057..345221(+) (comS) [Bacillus velezensis strain PMC206]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5