Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   URS_RS07110 Genome accession   NZ_AP018824
Coordinates   1484151..1486379 (-) Length   742 a.a.
NCBI ID   WP_004991560.1    Uniprot ID   A0A3F3LDL5
Organism   Acinetobacter ursingii strain M3     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1479151..1491379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  URS_RS07085 (URS_1448) - 1479212..1479733 (-) 522 WP_004991572.1 ClbS/DfsB family four-helix bundle protein -
  URS_RS07090 (URS_1449) - 1479827..1480156 (-) 330 WP_004991571.1 chaperone modulator CbpM -
  URS_RS07095 (URS_1450) - 1480168..1481112 (-) 945 WP_004991567.1 DnaJ C-terminal domain-containing protein -
  URS_RS07100 (URS_1451) - 1481283..1482158 (-) 876 WP_004991565.1 Hsp33 family molecular chaperone HslO -
  URS_RS07105 (URS_1452) - 1482209..1484062 (-) 1854 WP_004991563.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  URS_RS07110 (URS_1453) priA 1484151..1486379 (-) 2229 WP_004991560.1 primosomal protein N' Machinery gene
  URS_RS07115 (URS_1454) gspF 1486536..1487741 (+) 1206 WP_004991557.1 type II secretion system inner membrane protein GspF -
  URS_RS07120 (URS_1455) gspG 1487765..1488217 (+) 453 WP_004991554.1 type II secretion system major pseudopilin GspG -
  URS_RS07125 (URS_1456) - 1488548..1488886 (+) 339 WP_004991552.1 hypothetical protein -
  URS_RS07130 (URS_1457) - 1489019..1489357 (+) 339 WP_004991549.1 tRNA-binding protein -
  URS_RS07135 (URS_1458) lnt 1489423..1490982 (-) 1560 WP_004991547.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84630.94 Da        Isoelectric Point: 8.6594

>NTDB_id=71582 URS_RS07110 WP_004991560.1 1484151..1486379(-) (priA) [Acinetobacter ursingii strain M3]
MPNTPPPQTEIYRIRVAVPVYLYETFDYSLTQAQYQQAQVGARVAIPFGRQKLIGIITEKIAPDVPLDSRFQLKAIFELL
DDDAILDDKVLTLLTWSAQYYQFPIGEVMQAALPALLRQGKPLDILAHIWKIKPCEDAESKLKRSQKQFEAYQILKLHPT
GTTENILNLSGVETATLRALAKKDLVECHLETQDFRPTPVQLAQMPLTPNDDQKKAIQHVVQSLHHYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALMHSGLNDSKRLQAWQQAKMGKASIILGTRSAIYTP
LHNLGLIILDEEHDISYKQQEGFRYHARDVALYRGHLENCPVILGSATPSIDSYHLVEQEKLKLLQLNQRAGVALMPKMH
VIDLKVAKKKQGLSQQLIEQIKKKLDKKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYTYLHCHHCGTI
QRLPDQCPECQHQSLKTLGMGTGKVEEHLNELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNQPMILLGTQMLAKGHHFP
FVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGDVYLQTLRPDHPMLTTLIEKDYRAVAKHMLQERKAAL
LPPYRYAVLIRSDSKNRDYSQQFLADIAAQLQLMAQDSIEIWGPIPAPMERKAGRYRAHMVILSQDRARMHFFLRQWWAQ
VVHLPKQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=71582 URS_RS07110 WP_004991560.1 1484151..1486379(-) (priA) [Acinetobacter ursingii strain M3]
ATGCCAAACACGCCGCCACCTCAAACAGAGATTTACCGTATTCGGGTCGCTGTACCTGTCTATCTGTATGAGACCTTTGA
TTACAGCTTAACTCAGGCTCAATATCAACAGGCTCAGGTTGGCGCGCGCGTGGCAATTCCTTTCGGTCGGCAAAAACTGA
TTGGCATCATTACCGAGAAAATCGCGCCAGATGTTCCACTGGATTCACGGTTTCAGCTCAAAGCTATTTTTGAGTTGCTT
GATGATGATGCCATTTTAGATGACAAAGTTTTAACTTTGTTGACATGGTCAGCACAGTATTATCAGTTTCCGATTGGGGA
GGTGATGCAAGCGGCTTTGCCTGCACTGTTACGACAAGGCAAACCATTGGATATTTTGGCGCATATCTGGAAAATCAAAC
CTTGTGAAGATGCAGAATCCAAACTTAAACGCTCGCAAAAGCAATTTGAAGCCTATCAAATTTTAAAATTACACCCAACT
GGAACGACCGAAAATATTTTAAATTTAAGTGGAGTAGAAACTGCGACTTTACGCGCTTTGGCAAAAAAGGATCTGGTCGA
ATGTCATTTAGAAACACAAGATTTTCGACCGACACCCGTTCAATTGGCACAAATGCCCCTCACTCCCAACGATGATCAGA
AAAAAGCCATTCAACATGTGGTTCAGTCGCTCCATCATTATCAAGCTTTTTTACTGGACGGCTTAACAGGCAGTGGCAAA
ACCGAAGTCTATCTACACATCATGCATGAGGTGTTGAAACAAGGGAAGCAAGTGTTGGTTTTAGTGCCTGAAATCGGACT
AACCCCACAAACCATTTCCCGATTTAAATCGCGTTTTCATTGTGATGTTGCGTTGATGCATTCGGGCTTAAACGACTCCA
AACGTCTGCAAGCATGGCAACAAGCCAAAATGGGTAAAGCTTCAATCATTTTAGGCACACGCTCTGCTATTTATACGCCT
TTGCATAATCTTGGTTTAATCATTTTGGATGAAGAACACGATATTTCCTACAAACAACAGGAAGGTTTTCGTTATCATGC
ACGGGATGTGGCGCTGTATCGAGGGCACTTAGAAAACTGCCCTGTTATTTTAGGCTCAGCCACACCAAGTATTGATAGTT
ACCATCTGGTCGAACAGGAAAAATTAAAACTGCTACAACTCAATCAACGTGCGGGTGTGGCACTTATGCCCAAAATGCAT
GTGATTGATTTAAAGGTTGCCAAGAAAAAGCAAGGGTTGAGTCAACAACTGATTGAGCAAATCAAAAAAAAACTGGATAA
AAAAGAACAAGTGCTCATTTTTCTGAATCGTCGGGGTTATGCACCTGTTTTGGTTTGCGAAAGCTGTGGCTGGCAAGCCA
ATTGTCCACATTGTGATGCGCATTTTACGCTGCATACTCAACCTTACACTTATCTGCATTGTCACCATTGCGGTACGATT
CAGCGCTTACCCGATCAATGTCCAGAGTGTCAGCATCAGAGCCTAAAGACTCTCGGAATGGGAACAGGTAAAGTTGAAGA
ACATTTGAATGAACTTTTTCCAGATCATGATGTGATTCGGGTCGACCGCGACAGCACCAGTCGGGTCGGAAGCTGGCAGA
AAATTTATGATCGGATTCAGCAAAATCAACCCATGATCTTGCTGGGTACACAAATGCTCGCCAAAGGTCATCATTTTCCT
TTTGTCACCTTGGTTGCGATTTTAGATATTGATGCAGGTTTACTGTCTGTCGATGTTCGTGCACCTGAACGTACTGCACA
ATTGATTGTACAAGTGTCTGGTCGCGCTGGGCGGGGGGAACATAAAGGTGACGTTTATTTACAGACATTGAGACCTGATC
ATCCCATGCTCACCACGCTGATCGAAAAAGATTATCGTGCTGTCGCCAAACATATGCTGCAAGAGCGTAAAGCTGCATTG
TTGCCTCCTTATCGTTATGCAGTATTGATTCGTTCAGATTCTAAAAACCGTGACTATAGTCAGCAATTCTTAGCCGACAT
CGCAGCCCAATTACAGTTAATGGCGCAGGATAGTATTGAGATTTGGGGGCCTATTCCCGCGCCGATGGAACGCAAAGCTG
GACGCTATCGGGCGCATATGGTGATCTTGTCGCAAGATCGCGCACGTATGCACTTCTTTTTACGGCAATGGTGGGCGCAA
GTGGTACATTTACCTAAACAGCATCAATTACGTTTATCGATTGATGTTGATCCACAGGAATTTAACTAA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(643-738)

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3F3LDL5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

81.402

100

0.814

Multiple sequence alignment