Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | URS_RS06595 | Genome accession | NZ_AP018824 |
| Coordinates | 1366925..1367563 (+) | Length | 212 a.a. |
| NCBI ID | WP_104794744.1 | Uniprot ID | A0AA46NPU0 |
| Organism | Acinetobacter ursingii strain M3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1361925..1372563
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| URS_RS06580 (URS_1348) | - | 1362287..1363090 (+) | 804 | WP_004991763.1 | putative RNA methyltransferase | - |
| URS_RS06585 (URS_1349) | ponA | 1363139..1365703 (-) | 2565 | WP_104794746.1 | penicillin-binding protein PBP1a | - |
| URS_RS06590 (URS_1350) | pilM | 1365867..1366925 (+) | 1059 | WP_104794745.1 | pilus assembly protein PilM | Machinery gene |
| URS_RS06595 (URS_1351) | pilN | 1366925..1367563 (+) | 639 | WP_104794744.1 | PilN domain-containing protein | Machinery gene |
| URS_RS06600 (URS_1352) | pilO | 1367560..1368273 (+) | 714 | WP_044434144.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| URS_RS06605 (URS_1353) | pilP | 1368273..1368797 (+) | 525 | WP_004991753.1 | pilus assembly protein PilP | Machinery gene |
| URS_RS06610 (URS_1354) | pilQ | 1368860..1370989 (+) | 2130 | WP_171457979.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| URS_RS06615 (URS_1355) | aroK | 1371026..1371568 (+) | 543 | WP_004991750.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23748.76 Da Isoelectric Point: 4.9391
>NTDB_id=71574 URS_RS06595 WP_104794744.1 1366925..1367563(+) (pilN) [Acinetobacter ursingii strain M3]
MAKINLLPWRDELREQRKKQFIAFSAAVAVLGVVAVVLAWLFYDHKLNDQEQANQLIVSTNQNLDTQLKSLDGLQERRNA
IVERMKLIQGLEGQRPVTVRLIDELVRVTPSNMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
ADDKKDQNQSSVVPRVEESYGTFVVTTDLGEIGASVTEDNNDQSGSNTGAAQ
MAKINLLPWRDELREQRKKQFIAFSAAVAVLGVVAVVLAWLFYDHKLNDQEQANQLIVSTNQNLDTQLKSLDGLQERRNA
IVERMKLIQGLEGQRPVTVRLIDELVRVTPSNMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
ADDKKDQNQSSVVPRVEESYGTFVVTTDLGEIGASVTEDNNDQSGSNTGAAQ
Nucleotide
Download Length: 639 bp
>NTDB_id=71574 URS_RS06595 WP_104794744.1 1366925..1367563(+) (pilN) [Acinetobacter ursingii strain M3]
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGCGCAAGAAACAATTTATTGCATTTAGTGCTGC
GGTTGCAGTACTTGGGGTAGTAGCTGTGGTCTTGGCTTGGTTGTTTTATGATCATAAGCTTAACGATCAGGAACAAGCCA
ATCAATTGATTGTCAGTACCAACCAGAATCTGGATACGCAGTTGAAATCACTTGATGGTCTGCAAGAGCGCCGCAATGCG
ATCGTAGAGCGTATGAAGCTGATTCAAGGTTTGGAAGGTCAACGTCCAGTAACCGTTCGCTTGATTGATGAATTGGTGCG
GGTGACACCAAGTAATATGTATCTGACCAAATTCAGTCGTACAGGCGATAAATTTACCATTGAAGGCAAAGCGGAAAGTC
CAAATACTGTTGCAGAGTTGTTGCGTAACTTAGAAGCGTCACCGTGGTATCGCAATGCCTTTATGAACTCCTTCTTGGCG
GCAGATGATAAAAAAGATCAGAATCAAAGCTCTGTGGTGCCGCGTGTCGAAGAAAGCTATGGCACTTTCGTTGTGACCAC
AGATTTGGGTGAAATAGGGGCATCAGTTACAGAAGATAATAACGATCAATCAGGTTCAAATACGGGGGCAGCACAATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAGCAGCGCAAGAAACAATTTATTGCATTTAGTGCTGC
GGTTGCAGTACTTGGGGTAGTAGCTGTGGTCTTGGCTTGGTTGTTTTATGATCATAAGCTTAACGATCAGGAACAAGCCA
ATCAATTGATTGTCAGTACCAACCAGAATCTGGATACGCAGTTGAAATCACTTGATGGTCTGCAAGAGCGCCGCAATGCG
ATCGTAGAGCGTATGAAGCTGATTCAAGGTTTGGAAGGTCAACGTCCAGTAACCGTTCGCTTGATTGATGAATTGGTGCG
GGTGACACCAAGTAATATGTATCTGACCAAATTCAGTCGTACAGGCGATAAATTTACCATTGAAGGCAAAGCGGAAAGTC
CAAATACTGTTGCAGAGTTGTTGCGTAACTTAGAAGCGTCACCGTGGTATCGCAATGCCTTTATGAACTCCTTCTTGGCG
GCAGATGATAAAAAAGATCAGAATCAAAGCTCTGTGGTGCCGCGTGTCGAAGAAAGCTATGGCACTTTCGTTGTGACCAC
AGATTTGGGTGAAATAGGGGCATCAGTTACAGAAGATAATAACGATCAATCAGGTTCAAATACGGGGGCAGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
73.709 |
100 |
0.741 |
| comN | Acinetobacter baylyi ADP1 |
74.163 |
98.585 |
0.731 |