Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NQ527_RS04270 Genome accession   NZ_CP102270
Coordinates   858945..860768 (+) Length   607 a.a.
NCBI ID   WP_005603866.1    Uniprot ID   D4S1J9
Organism   Eshraghiella crossota strain DSM 2876     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 853945..865768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQ527_RS04250 (NQ527_04250) - 854300..855388 (+) 1089 WP_040332107.1 HD-GYP domain-containing protein -
  NQ527_RS04255 (NQ527_04255) - 855393..856067 (+) 675 WP_005603871.1 response regulator transcription factor -
  NQ527_RS04260 (NQ527_04260) - 856076..857095 (+) 1020 WP_005603870.1 HAMP domain-containing sensor histidine kinase -
  NQ527_RS04265 (NQ527_04265) rcrP 857189..858943 (+) 1755 WP_005603868.1 ABC transporter ATP-binding protein Regulator
  NQ527_RS04270 (NQ527_04270) rcrQ 858945..860768 (+) 1824 WP_005603866.1 ABC transporter ATP-binding protein Regulator
  NQ527_RS04275 (NQ527_04275) - 860790..861386 (+) 597 WP_005603864.1 AAA family ATPase -
  NQ527_RS04280 (NQ527_04280) - 861389..862408 (+) 1020 WP_005603862.1 FAD:protein FMN transferase -
  NQ527_RS04285 (NQ527_04285) - 862633..863511 (+) 879 WP_005603861.1 LysR family transcriptional regulator -
  NQ527_RS04290 (NQ527_04290) - 863528..864493 (+) 966 WP_005603858.1 ketopantoate reductase family protein -
  NQ527_RS04300 (NQ527_04300) - 865173..865400 (-) 228 WP_005603854.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67699.54 Da        Isoelectric Point: 7.0055

>NTDB_id=715667 NQ527_RS04270 WP_005603866.1 858945..860768(+) (rcrQ) [Eshraghiella crossota strain DSM 2876]
MEENRQYNNPPRRGGHGAGRPVERSKDFKGTWIKILKYNKKLSYAMLCAVIFSVAATIFTLIGPDKLKDLTNTITAGFMT
GVDMDKVFNIGITLVILYASGTVLSILQGQIMAVVTQKISKNLRNEISEKINRLPMWYYNTTSTGDILSRVTNDVDMIGQ
SLNMSIGMLISSVTLLLGSVFMMFKTNVLMTVTAILSSLFGFALMMIIMGKSQKYFKRQQKHLGEINGQIEEIYTGHTVV
KAYNGEEKAAEEFNRMNENLRDSAFKAQCLSGLMMPIMNFIGNFGYVAVCIVGAVLAMNGKISFGVIVAFMIYIRLFTQP
LSQIAQAMQSMQSAAAAAERVFEFVEAEEMENEDDKTGKVENVKGYVDFEHVKFGYKGSDKIVIKDFSVNVKPGQKIAIV
GPTGAGKTTLVNLLMRFHEINDGVIRIDGVSTKDMKREDVHSLFCMVLQDTWIFEGTVRENLVYCTEGVSDEKVKEACRA
VGLDHFIKTLSHGYDTILNDQVNLSQGQKQQLTIARAMIADKPMLILDEATSSVDTRTELQIQEAMDKLMADRTSFVIAH
RLSTIKNADLILVMKDGDIIEKGTHEELLARKGFYADLYNSQFEQAS

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=715667 NQ527_RS04270 WP_005603866.1 858945..860768(+) (rcrQ) [Eshraghiella crossota strain DSM 2876]
ATGGAAGAAAACAGACAATATAACAATCCTCCTAGACGTGGAGGACACGGAGCCGGCAGACCTGTGGAGAGATCCAAGGA
TTTTAAGGGAACATGGATTAAAATTTTAAAATATAATAAAAAGTTGTCGTATGCAATGCTTTGTGCCGTTATTTTTTCGG
TAGCTGCTACGATATTTACACTTATCGGTCCGGATAAGTTAAAGGACCTTACCAATACAATTACCGCAGGATTTATGACC
GGTGTGGATATGGATAAAGTATTTAACATTGGTATAACACTTGTGATTTTGTATGCCTCCGGTACTGTTCTTTCAATACT
TCAGGGACAGATAATGGCAGTTGTTACACAGAAGATAAGTAAGAACCTTCGTAATGAGATTTCTGAAAAAATTAACAGAC
TTCCTATGTGGTATTACAATACAACATCGACAGGTGATATCCTTTCGAGAGTAACCAATGATGTAGATATGATAGGACAG
TCCCTTAATATGAGCATAGGTATGCTTATATCATCCGTTACCTTGCTTTTAGGTTCTGTATTTATGATGTTTAAGACCAA
TGTTCTTATGACCGTAACGGCAATACTGTCGTCTTTATTCGGATTTGCCCTTATGATGATAATTATGGGCAAATCACAGA
AGTATTTCAAGAGACAGCAGAAGCATCTCGGAGAAATTAATGGACAGATTGAAGAAATATACACAGGGCACACAGTTGTC
AAAGCATATAACGGAGAAGAAAAGGCAGCAGAAGAATTTAACAGAATGAATGAAAATCTTCGTGACAGCGCTTTTAAGGC
ACAGTGTTTATCAGGCCTTATGATGCCTATTATGAATTTTATCGGTAACTTCGGATATGTCGCAGTATGTATCGTCGGTG
CTGTGCTTGCCATGAACGGAAAAATATCATTTGGTGTAATTGTTGCATTTATGATATATATCCGTCTTTTCACACAGCCT
TTATCCCAGATTGCACAGGCTATGCAGTCAATGCAGTCAGCAGCGGCGGCAGCAGAACGTGTATTTGAGTTTGTTGAAGC
AGAAGAAATGGAAAATGAAGATGACAAGACCGGAAAGGTTGAAAATGTTAAAGGTTATGTGGACTTTGAACATGTAAAAT
TCGGCTATAAAGGCTCAGATAAGATTGTCATTAAAGATTTTTCCGTTAATGTAAAACCGGGACAGAAGATAGCGATTGTA
GGACCTACAGGGGCCGGAAAGACAACACTTGTGAACCTTCTTATGAGATTCCATGAGATTAATGACGGCGTTATCAGGAT
TGACGGCGTTTCTACAAAAGACATGAAGCGTGAGGACGTCCATTCATTGTTCTGTATGGTATTACAGGACACATGGATTT
TTGAAGGAACAGTAAGAGAGAACCTTGTATATTGTACAGAGGGTGTCTCCGATGAAAAGGTAAAAGAAGCATGTCGTGCG
GTAGGACTTGATCATTTTATAAAGACATTATCCCACGGATATGATACAATACTCAATGACCAGGTAAATCTTTCACAGGG
ACAGAAGCAGCAGCTTACAATAGCGAGAGCAATGATTGCGGATAAGCCGATGTTAATACTTGATGAAGCAACAAGTTCCG
TTGATACAAGAACTGAGTTACAGATTCAGGAGGCAATGGATAAACTCATGGCTGACAGGACATCTTTTGTCATTGCCCAC
AGATTATCTACAATTAAGAATGCAGACCTTATCCTTGTAATGAAAGATGGAGACATTATTGAAAAAGGTACACATGAAGA
ACTTCTTGCCAGAAAAGGCTTCTATGCAGACCTTTATAACAGCCAGTTTGAACAGGCTTCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(46-321)

ABC transporter (ABC_tran)

(385-532)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB D4S1J9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.989

91.928

0.524