Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NQ527_RS04265 Genome accession   NZ_CP102270
Coordinates   857189..858943 (+) Length   584 a.a.
NCBI ID   WP_005603868.1    Uniprot ID   -
Organism   Eshraghiella crossota strain DSM 2876     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 852189..863943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQ527_RS04245 (NQ527_04245) pyk 852871..854283 (+) 1413 WP_005603875.1 pyruvate kinase -
  NQ527_RS04250 (NQ527_04250) - 854300..855388 (+) 1089 WP_040332107.1 HD-GYP domain-containing protein -
  NQ527_RS04255 (NQ527_04255) - 855393..856067 (+) 675 WP_005603871.1 response regulator transcription factor -
  NQ527_RS04260 (NQ527_04260) - 856076..857095 (+) 1020 WP_005603870.1 HAMP domain-containing sensor histidine kinase -
  NQ527_RS04265 (NQ527_04265) rcrP 857189..858943 (+) 1755 WP_005603868.1 ABC transporter ATP-binding protein Regulator
  NQ527_RS04270 (NQ527_04270) rcrQ 858945..860768 (+) 1824 WP_005603866.1 ABC transporter ATP-binding protein Regulator
  NQ527_RS04275 (NQ527_04275) - 860790..861386 (+) 597 WP_005603864.1 AAA family ATPase -
  NQ527_RS04280 (NQ527_04280) - 861389..862408 (+) 1020 WP_005603862.1 FAD:protein FMN transferase -
  NQ527_RS04285 (NQ527_04285) - 862633..863511 (+) 879 WP_005603861.1 LysR family transcriptional regulator -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64637.33 Da        Isoelectric Point: 7.8426

>NTDB_id=715666 NQ527_RS04265 WP_005603868.1 857189..858943(+) (rcrP) [Eshraghiella crossota strain DSM 2876]
MIKLLKNLPKRNWLMMLFAIGFVVLQVWLDLTIPDYMADITALVQTDGSKMADIMAAGGKMLLCAFGSLAATVVVAIISS
RIASDFSAVLRAKLFNKVQGFSMEEIGRFSTASLITRSTNDVTQVQMFVTMGFQVLIKAPILAIWAVCKISAKSWQWTFS
TGVAVAVLLIIVGLCVSIALPKFKKLQELTDDINRVTRENITGINVVRAYNAEKYQENKFETANNNLTKTQLFTSRTMSF
MMPGIQLIMSGLPLAIYWIGAYLINKADMMSKITLFSDMVTFSSYAMQIVMAFMMMVMVFIILPRASVAAKRINEVLDTE
ATIEDGDKDIKDSGIRGEIEFKNVNFKYPDAEDYVLSDISFSVKKGETLAIIGATGCGKSTVINLIPRFYDVTEGEVLVD
GVNVKDYKQKELRNKIGYVSQKATLFGGTVKSNIAYGDNGKDGFMESDIVDSVYVAQASEFVEKMGEGYDSYIAQGGGNL
SGGQKQRLSIARAVCRHPEIFIFDDSFSALDYRTDRALRSALKKECADATKIIVAQRIGTIRDADKIIVLENGTIAGMGK
HDELMKNCEVYRQIAYSQLSKEEL

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=715666 NQ527_RS04265 WP_005603868.1 857189..858943(+) (rcrP) [Eshraghiella crossota strain DSM 2876]
ATGATTAAATTACTTAAAAACCTGCCAAAGAGAAATTGGCTTATGATGCTTTTTGCCATAGGTTTTGTAGTTCTCCAGGT
ATGGCTTGATTTAACGATACCTGACTATATGGCAGACATTACGGCACTTGTCCAGACCGACGGAAGCAAGATGGCAGATA
TTATGGCAGCAGGCGGAAAAATGCTGCTTTGTGCATTCGGAAGTCTTGCGGCTACGGTTGTTGTAGCTATTATTTCTTCA
AGAATAGCTTCAGATTTTTCAGCCGTATTAAGAGCAAAACTTTTTAATAAGGTCCAGGGATTTTCAATGGAGGAAATTGG
AAGATTCTCTACTGCGAGTCTTATTACACGTTCAACCAACGATGTTACACAGGTACAGATGTTTGTAACAATGGGCTTTC
AGGTATTGATTAAAGCTCCTATTCTTGCAATATGGGCGGTGTGCAAAATATCAGCAAAGAGCTGGCAGTGGACATTTTCA
ACAGGTGTTGCTGTTGCGGTATTACTTATCATAGTAGGTCTTTGTGTATCAATAGCACTTCCTAAGTTCAAAAAACTTCA
GGAACTTACAGATGATATCAACAGGGTTACCAGAGAAAATATTACAGGTATCAATGTTGTAAGAGCATATAATGCCGAGA
AATATCAGGAAAATAAATTTGAAACCGCTAATAATAACCTTACAAAGACACAACTTTTTACATCAAGGACAATGTCGTTT
ATGATGCCGGGTATCCAGCTTATAATGAGCGGACTCCCTCTTGCCATATACTGGATAGGGGCATATCTCATTAATAAAGC
CGATATGATGAGCAAAATAACTTTATTTTCCGATATGGTAACATTTTCTTCTTATGCAATGCAGATAGTAATGGCATTTA
TGATGATGGTAATGGTATTTATTATTCTGCCGAGAGCATCCGTAGCAGCTAAGCGTATTAATGAAGTGCTTGATACGGAA
GCTACTATAGAAGATGGAGACAAGGATATTAAAGATTCAGGTATCAGAGGTGAAATTGAATTTAAGAATGTTAATTTTAA
ATATCCTGATGCAGAAGATTATGTATTGTCAGATATCAGCTTCTCTGTTAAAAAAGGTGAGACATTGGCGATTATAGGAG
CTACCGGATGTGGTAAGAGTACCGTTATTAATCTTATTCCAAGATTCTATGATGTCACTGAAGGCGAAGTCCTGGTAGAC
GGCGTAAATGTAAAAGATTACAAACAGAAAGAACTTCGTAACAAAATCGGATATGTTTCGCAGAAAGCTACATTATTCGG
AGGAACGGTTAAAAGTAACATTGCATACGGTGATAATGGAAAAGATGGCTTTATGGAATCTGATATTGTGGATTCTGTAT
ATGTCGCACAGGCATCCGAATTTGTTGAAAAAATGGGTGAAGGATATGATTCTTATATAGCACAAGGCGGAGGTAATCTT
TCAGGAGGCCAGAAACAGAGACTTTCAATAGCAAGAGCCGTGTGCCGTCATCCGGAGATATTTATTTTTGATGATTCATT
CTCGGCACTTGATTACAGAACCGACAGAGCTTTACGTTCTGCACTTAAAAAAGAATGTGCTGATGCTACAAAGATTATTG
TTGCACAGAGAATCGGCACGATAAGAGATGCAGATAAGATAATTGTTCTGGAAAATGGTACCATTGCAGGAATGGGTAAG
CATGATGAGCTTATGAAAAATTGTGAAGTATACAGACAGATAGCATATTCGCAGTTATCAAAGGAGGAACTCTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(16-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

50.839

100

0.519