Detailed information NTG0715600

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: NQ503_RS06500
• Genome accession: NZ_CP102265
• Coordinates: 1360964..1362355 (+)
• Length: 463 a.a.
• NCBI ID: WP_005425225.1
• Uniprot ID: A0A415L9J6
• Organism: Blautia obeum ATCC 29174
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1355964..1367355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQ503_RS06480 (NQ503_06480)	-	1356620..1357384 (+)	765	WP_005425220.1	SseB family protein	-
NQ503_RS06485 (NQ503_06485)	-	1357512..1357889 (+)	378	WP_022388085.1	GntR family transcriptional regulator	-
NQ503_RS06490 (NQ503_06490)	-	1357902..1360364 (+)	2463	WP_022388084.1	ATP-dependent Clp protease ATP-binding subunit	-
NQ503_RS06495 (NQ503_06495)	-	1360557..1360970 (+)	414	WP_005425224.1	hypothetical protein	-
NQ503_RS06500 (NQ503_06500)	radA	1360964..1362355 (+)	1392	WP_005425225.1	DNA repair protein RadA	Machinery gene

Sequence

Protein

• Length: 463 a.a.
• Molecular weight: 50483.43 Da
• Isoelectric Point: 7.7301

>NTDB_id=715600 NQ503_RS06500 WP_005425225.1 1360964..1362355(+) (radA) [Blautia obeum ATCC 29174]
MLKNKKVVYFCQECGYESSKWMGQCPGCRAWNTFVEETVSTKKVSSTGSSLQNGLRRAEPVVLKDIRLSEDERKLTNIGE
LDRVLGGGIVPGSLVLVGGDPGIGKSTLLLQVCRNLAMSGNSVLYISGEESLRQIKLRAERIGEFNENLQLLCETNLETI
REVIERKKPDMVVIDSIQTMFHEDISSAPGSVSQVRESTNILMQIAKGQGVSIFIVGHVTKEGNVAGPRVLEHMVDTVLY
FEGDRHASYRILRAVKNRFGSTNEIGVFEMRNTGLEEVKNPSEFMLNGKPNGTSGSIVACSMEGTRPILVEIQALVCQSN
FGIPRRTAVGTDFNRVNLLMAVLEKKVGIHLAACDAYVNIAGGMKMTEPAIDLGISLAVVSSCKDIIIPDSVIAFGEVGL
SGEVRAVSMAGQRVAEAKKLGFDTVILPEVCKSSVGKVSGINLVYVSWIQDAIRYIMKNNYKL

Nucleotide

• Length: 1392 bp

>NTDB_id=715600 NQ503_RS06500 WP_005425225.1 1360964..1362355(+) (radA) [Blautia obeum ATCC 29174]
ATGCTAAAAAATAAAAAGGTTGTTTATTTTTGTCAGGAATGTGGGTATGAGTCTTCAAAGTGGATGGGACAATGTCCTGG
ATGCAGAGCATGGAATACATTTGTTGAAGAAACAGTTTCCACAAAGAAGGTATCTTCGACGGGAAGCAGTCTACAGAACG
GTTTGCGAAGAGCTGAACCGGTAGTATTAAAAGACATCAGACTTTCGGAAGATGAAAGAAAACTGACGAATATAGGAGAG
CTTGACAGAGTACTCGGGGGCGGCATTGTCCCCGGGTCTTTGGTATTGGTGGGTGGAGATCCGGGAATCGGAAAATCCAC
CCTTCTTTTACAGGTTTGCAGAAATCTGGCGATGTCGGGTAATTCTGTATTATATATATCAGGTGAAGAATCTTTGCGGC
AGATTAAATTACGTGCTGAACGTATTGGGGAGTTCAATGAGAATCTCCAGTTACTATGTGAGACAAATCTGGAAACAATC
AGAGAGGTGATTGAAAGAAAAAAACCGGATATGGTCGTGATTGATTCAATCCAGACGATGTTCCATGAAGATATCAGTTC
GGCACCAGGCAGTGTTTCGCAGGTTAGGGAATCAACGAATATTCTGATGCAGATTGCCAAAGGTCAGGGTGTTTCTATTT
TTATCGTAGGACATGTGACAAAAGAAGGCAATGTAGCAGGTCCGAGAGTTTTGGAACATATGGTGGATACAGTGCTGTAT
TTTGAGGGAGACCGTCATGCGTCTTATCGTATTCTTCGTGCTGTCAAAAACAGATTTGGATCTACAAATGAAATTGGTGT
ATTTGAAATGAGAAATACAGGACTGGAAGAAGTGAAGAATCCGTCAGAGTTTATGCTAAACGGAAAGCCGAATGGGACAT
CTGGTTCCATTGTTGCGTGCTCGATGGAAGGAACACGACCAATCCTTGTGGAGATTCAGGCACTGGTCTGTCAGAGCAAT
TTTGGAATACCAAGAAGAACTGCGGTGGGAACTGATTTTAACAGAGTAAATCTGCTTATGGCTGTATTAGAAAAAAAAGT
AGGAATTCATCTGGCAGCCTGCGATGCATATGTAAATATCGCAGGTGGCATGAAAATGACAGAGCCTGCGATTGATTTGG
GAATCTCACTGGCAGTTGTATCGAGCTGCAAAGATATTATCATTCCGGATTCAGTGATCGCATTTGGCGAAGTTGGATTA
AGTGGTGAGGTCCGGGCAGTGAGTATGGCAGGACAAAGAGTGGCCGAAGCGAAAAAACTTGGTTTTGATACAGTGATCTT
GCCGGAAGTATGTAAATCGTCTGTGGGAAAAGTTTCTGGCATTAATCTGGTATATGTGTCCTGGATTCAAGATGCAATTC
GTTATATCATGAAGAATAATTATAAATTATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (74-223)

• Subunit ChlI of Mg-chelatase (ChlI) (345-429)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

3D structure

• AlphaFold DB: A0A415L9J6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	57.269	98.056	0.562
radA	Streptococcus mitis NCTC 12261	51.304	99.352	0.51
radA	Streptococcus mitis SK321	51.304	99.352	0.51
radA	Streptococcus pneumoniae Rx1	51.304	99.352	0.51
radA	Streptococcus pneumoniae D39	51.304	99.352	0.51
radA	Streptococcus pneumoniae R6	51.304	99.352	0.51
radA	Streptococcus pneumoniae TIGR4	51.304	99.352	0.51