Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   URS_RS02260 Genome accession   NZ_AP018824
Coordinates   475309..479934 (-) Length   1541 a.a.
NCBI ID   WP_005002139.1    Uniprot ID   N9DC58
Organism   Acinetobacter ursingii strain M3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 470309..484934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  URS_RS02240 (URS_0463) - 470535..471554 (+) 1020 WP_010588607.1 class I SAM-dependent methyltransferase -
  URS_RS02245 (URS_0464) - 471568..473028 (+) 1461 WP_005002144.1 amino acid permease -
  URS_RS02250 (URS_0465) - 473333..474538 (+) 1206 WP_119686335.1 RtcB family protein -
  URS_RS16835 (URS_0466) - 474558..474722 (+) 165 WP_004992481.1 hypothetical protein -
  URS_RS02255 (URS_0467) - 474857..475309 (-) 453 WP_004992479.1 hypothetical protein -
  URS_RS02260 (URS_0468) chpA 475309..479934 (-) 4626 WP_005002139.1 Hpt domain-containing protein Regulator
  URS_RS02265 (URS_0469) - 480083..482164 (-) 2082 WP_005002137.1 methyl-accepting chemotaxis protein -
  URS_RS02270 (URS_0470) - 482212..482748 (-) 537 WP_004992475.1 chemotaxis protein CheW -
  URS_RS02275 (URS_0471) - 482754..483122 (-) 369 WP_004992474.1 response regulator -
  URS_RS02280 (URS_0472) pilG 483150..483533 (-) 384 WP_004992473.1 twitching motility response regulator PilG Regulator
  URS_RS02285 (URS_0473) - 483839..484486 (+) 648 WP_005002135.1 hypothetical protein -

Sequence


Protein


Download         Length: 1541 a.a.        Molecular weight: 173097.29 Da        Isoelectric Point: 4.3865

>NTDB_id=71557 URS_RS02260 WP_005002139.1 475309..479934(-) (chpA) [Acinetobacter ursingii strain M3]
MKEILKHLVEKISLPEDSFLDQDEEILEIFIEELEEIFQELGQLIPQWVADSDEQQVLADVRRHFHTLKGSGRMVGAKSS
SELAWTVEEALNRIIAKTLPLSADLQRFVQVVFNVYRFKFYHDFKNTQPHSIDIRPLVLLGQQLQHQQDVEPALEELLDL
AEQLNTESGITGLEIQQQQIIEAEQPVEVEPAAIADTCVDAVASSDDSLIEETMAIFLEEAEEHLQTIDTFLQQDEPSDQ
SYNQLIRALHTLRGSSSMAHIQQVFEASSKVETLFKTLMQDELESTSNETALLTHYAEFVRDYLHTLHQKGTQQQLDKID
QKFNQAWENYGFNIEEIAHEAQHPQGVVTSLLQLDIENLLNADYEFEKRVKQEFPVYIQALITEASSLIEHTHNRAAQGV
HDYVLQLKPAYEQLLEKPELLHLDYAFDIFGQAHQQVIHLFDTLAAGQRVSLGQEQLNVIHELQDFVQQDIETAITDKKV
SSELSADKVSAEPETISIEPVAVSESNVSTFDLSSISARIQQDHQHLDSEQANRHFDADLLDIFLEEADELLVGIDADLN
TWSQQQSNTSALNNLMRYLHTLKGGANMVQATYMGLIAHELETIYQRLIHGQIHSSENLIQIIRLVQDDIADRIQTLRDE
AVDYPATEVIELLGNIEQVLQGVPQQQPESATWTTSVDSTLAQVVAEPPTEVVEHELTTDHLESVALGEPTSGVESDAVV
AEEQLQNSTSAENDALESQASISNTNVDIDNTKPHQDTDPDDVQSLVEATFYEEAAELLDAGQQLLNRWFDERTNRSILL
QLQRTVHSLKGGARMAELEPVAVIASHLENAFEQFAVKAFSSNAYDHLLLTAFTWLKAAIFERSYNNYDGLKHTLERLEF
VDTNAQIPTKLARADLFSQEQVMEFVQGDGTEPPSMLGEWDNTVQADDSNEMIRVSADLIEKMINLSGENAINRSRIEMD
LGQLGNTLVEMELAIQRLADQLRRMEGELESQIIAKHGTENLRYIDFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLS
DKIRDTEGLLLQQSRIQAEIQESLMRTRLVPFSRLLPRLQRIVRQTASSLNRPAELVVNNTEGELDRNILERLVTPLEHM
LRNAVDHGVEDREERLKLGKPEIGRIELNISRQGTDVLVSFSDDGKGIDVNKIKAKALENGLMTEDQKLEAQEILQYIFH
PGFSTATSVTQISGRGVGLDVVQSSIKALGGHVSVDSTFGSGTTFTIRVPTTVAVSDALMVKVGDQQFALPLAQIDRIVR
IAPATLERYFHGQDDYFNIDNTPYRLRYLAEFVSNQPIPKLSGIAHSLPVLLVKGAHGQTIALLVDQLVGSRAQIVVKPI
GRQFASIGAVAGATILGDGHVCLILDGQNIARQIQSTQRNKQVVEGREKTRHTDERRLIMIVDDSVTVRKVTSRLLERQG
FDVVTAKDGVDAMEQLENVKPDLMLLDIEMPRMDGFEVTNLVRHHELHQDMPIIMITSRTGEKHRERALSLGVTHYMGKP
FQESELLENIEALLETASGSY

Nucleotide


Download         Length: 4626 bp        

>NTDB_id=71557 URS_RS02260 WP_005002139.1 475309..479934(-) (chpA) [Acinetobacter ursingii strain M3]
ATGAAAGAAATATTAAAACATCTTGTTGAAAAAATAAGCTTACCTGAAGACAGTTTTCTTGATCAGGATGAAGAAATTCT
TGAAATTTTTATTGAAGAATTAGAAGAAATTTTTCAAGAATTGGGTCAACTTATTCCGCAGTGGGTGGCTGATTCTGATG
AGCAGCAGGTTTTAGCGGACGTTCGTCGCCATTTTCATACTCTAAAAGGGTCTGGTCGAATGGTGGGGGCGAAATCTTCC
AGTGAACTGGCGTGGACAGTTGAAGAAGCACTCAATCGAATTATTGCCAAAACTTTGCCATTAAGTGCAGATTTACAACG
TTTTGTGCAAGTGGTATTTAATGTTTATCGTTTTAAATTTTATCATGATTTTAAAAATACCCAGCCACACTCTATCGATA
TTCGCCCATTGGTTTTGTTGGGACAGCAGTTACAACACCAACAAGACGTCGAGCCTGCTTTAGAAGAATTACTCGATTTA
GCTGAACAGTTAAATACAGAATCTGGAATTACAGGGCTCGAAATTCAGCAACAACAGATTATTGAAGCTGAACAGCCAGT
TGAAGTAGAGCCTGCTGCCATAGCTGACACCTGTGTGGACGCAGTTGCTTCATCAGATGATAGTCTGATTGAAGAAACCA
TGGCGATTTTCCTTGAAGAAGCAGAAGAACATCTACAAACAATTGATACTTTTTTACAGCAAGATGAGCCATCAGATCAA
AGTTATAATCAATTGATTCGCGCTTTGCATACTTTGCGCGGCAGTTCATCAATGGCGCATATTCAGCAAGTATTTGAAGC
CAGCAGCAAGGTAGAAACGCTGTTTAAAACCTTGATGCAAGATGAGCTTGAGTCGACTTCAAATGAAACCGCTCTCTTAA
CCCACTATGCTGAATTTGTTCGAGATTATCTACATACACTGCATCAAAAGGGTACTCAGCAACAGCTTGACAAAATTGAT
CAAAAATTTAATCAAGCATGGGAAAACTATGGCTTTAATATCGAAGAAATTGCACATGAAGCACAGCATCCACAAGGTGT
TGTCACTTCACTATTGCAATTAGATATTGAAAATCTGCTGAATGCAGACTATGAGTTTGAAAAACGCGTCAAACAGGAAT
TCCCTGTCTATATTCAAGCATTGATTACCGAGGCAAGTTCTTTAATTGAGCATACGCATAATCGAGCAGCCCAAGGCGTT
CATGATTATGTCTTGCAATTAAAGCCTGCTTATGAACAATTACTTGAAAAACCTGAATTACTGCATCTGGATTATGCCTT
TGATATTTTTGGACAGGCACACCAGCAAGTCATTCATTTATTTGATACCTTGGCAGCAGGGCAGCGAGTAAGCTTGGGAC
AAGAGCAACTCAATGTGATTCATGAGCTGCAAGACTTTGTCCAACAAGATATTGAAACAGCGATTACGGATAAGAAAGTA
TCATCTGAGCTAAGTGCTGATAAAGTAAGTGCTGAACCTGAGACTATTTCCATTGAGCCTGTTGCGGTATCAGAGTCAAA
TGTTTCAACATTTGATTTATCGTCAATTTCTGCACGTATTCAACAAGATCATCAGCACCTAGATTCAGAGCAAGCCAATC
GTCATTTCGATGCAGACCTTCTCGATATCTTTTTAGAAGAAGCTGATGAGCTGTTGGTCGGTATTGACGCAGACCTAAAC
ACTTGGTCGCAGCAACAAAGTAATACGTCTGCCTTGAATAATTTGATGCGCTATTTACACACCTTAAAAGGTGGCGCAAA
TATGGTTCAGGCAACCTATATGGGACTGATTGCGCACGAGTTAGAAACCATTTATCAACGCTTGATTCATGGGCAAATAC
ATTCTTCTGAAAATCTGATACAGATTATTCGTCTGGTACAAGATGATATTGCTGATCGGATTCAAACGTTGCGTGATGAA
GCAGTAGATTATCCAGCGACAGAAGTGATTGAGTTGCTTGGAAATATTGAGCAGGTTCTACAAGGGGTACCACAGCAACA
GCCTGAGAGTGCAACGTGGACTACTTCTGTTGATAGTACCTTGGCGCAAGTTGTTGCTGAGCCACCAACTGAAGTTGTTG
AGCATGAATTAACGACAGATCATCTTGAATCAGTTGCTCTTGGTGAACCAACATCAGGCGTGGAATCTGATGCAGTTGTT
GCTGAGGAACAATTACAGAATTCGACTTCCGCTGAGAATGATGCACTAGAAAGTCAAGCATCGATTTCAAATACTAATGT
TGATATCGATAATACCAAACCGCATCAAGATACAGATCCCGATGATGTTCAATCTTTGGTTGAAGCGACTTTCTATGAAG
AAGCGGCAGAGTTGCTTGATGCTGGACAGCAACTTCTCAATCGCTGGTTTGATGAACGGACTAACCGAAGTATTTTGCTT
CAATTGCAACGTACAGTGCATAGTTTAAAAGGCGGTGCACGAATGGCAGAGTTAGAGCCTGTTGCAGTAATTGCCTCACA
TCTTGAAAATGCCTTTGAGCAATTTGCGGTAAAAGCCTTTAGCTCCAATGCTTATGACCATCTCTTGCTGACGGCATTTA
CATGGTTAAAGGCAGCTATTTTTGAACGTTCGTATAATAATTATGATGGTTTAAAGCATACCTTAGAACGTCTTGAATTT
GTCGATACCAATGCGCAAATTCCAACTAAACTGGCTCGCGCGGATCTATTCTCGCAAGAACAAGTGATGGAGTTTGTACA
GGGAGATGGTACAGAACCGCCATCTATGCTGGGTGAATGGGACAACACCGTACAGGCTGATGATTCAAATGAGATGATCC
GTGTTTCTGCGGATCTGATCGAAAAAATGATTAACTTGTCTGGTGAAAATGCGATTAACCGTTCGCGTATCGAAATGGAT
TTGGGACAGTTAGGCAATACACTGGTCGAAATGGAATTGGCGATTCAACGTTTGGCAGATCAGTTACGTCGAATGGAAGG
CGAATTAGAAAGTCAGATTATCGCCAAACATGGGACAGAAAACTTACGTTATATCGACTTTGACCCATTAGAAATGGATC
AATACTCATCATTGAATCAACTGTCAAAATCGCTTGCTGAATCTGCATCGGATTTGGTTGATTTCAAAACCACATTATCC
GACAAAATTCGTGATACCGAAGGTTTGTTATTACAACAATCACGTATTCAGGCTGAAATTCAGGAAAGTCTGATGCGTAC
CCGATTAGTTCCGTTCTCACGACTTTTACCTCGCTTACAGCGTATTGTGCGTCAGACGGCAAGTAGTTTGAACCGTCCAG
CTGAATTGGTAGTCAATAATACCGAAGGCGAACTGGATCGAAATATCTTGGAACGCTTGGTCACGCCACTTGAACACATG
CTGCGAAATGCAGTCGATCATGGTGTGGAAGATCGTGAAGAGCGTTTAAAACTGGGTAAACCTGAAATAGGGCGTATTGA
GCTAAATATTAGCCGCCAAGGAACAGATGTTTTGGTGAGCTTTAGCGATGATGGTAAAGGTATTGATGTTAATAAAATCA
AAGCCAAAGCTTTAGAAAATGGTTTGATGACTGAGGATCAAAAACTCGAAGCACAGGAAATTTTGCAATACATTTTCCAT
CCTGGGTTTAGTACAGCGACTTCAGTGACCCAAATTTCAGGACGTGGTGTGGGTCTGGATGTGGTGCAAAGTAGTATTAA
GGCGCTTGGTGGTCATGTCAGTGTCGATTCAACATTTGGTTCTGGTACCACTTTTACTATTCGTGTACCAACGACTGTGG
CAGTGAGTGATGCACTCATGGTGAAAGTCGGTGATCAGCAATTTGCCTTGCCTTTGGCTCAGATTGACCGAATTGTGCGT
ATTGCGCCTGCAACTCTTGAACGCTATTTCCATGGTCAGGATGATTATTTTAATATCGATAATACTCCATATCGTTTACG
TTATTTGGCGGAGTTTGTCAGCAATCAGCCTATTCCAAAATTATCTGGTATTGCACATTCATTGCCTGTGTTATTGGTCA
AAGGCGCGCATGGTCAGACCATTGCGTTATTGGTCGATCAATTGGTCGGTTCGCGTGCACAAATTGTAGTGAAACCAATC
GGACGACAGTTCGCAAGTATTGGCGCTGTTGCTGGGGCGACAATTTTAGGTGATGGTCATGTTTGTCTAATTCTGGATGG
ACAAAATATTGCGCGTCAGATCCAATCTACGCAACGTAATAAACAAGTTGTTGAAGGCAGAGAAAAAACACGTCATACCG
ATGAACGTCGTCTTATCATGATCGTAGATGACTCGGTGACTGTCCGTAAAGTTACTTCGCGGCTACTGGAACGTCAGGGC
TTTGATGTGGTGACGGCCAAAGATGGTGTCGATGCCATGGAACAGCTTGAAAATGTCAAACCTGATTTGATGTTGCTGGA
TATTGAAATGCCTCGCATGGATGGTTTTGAGGTGACTAATCTGGTACGCCATCATGAGTTACATCAGGATATGCCAATTA
TCATGATTACATCGCGTACTGGTGAAAAACATCGTGAACGGGCATTATCACTTGGCGTAACGCATTACATGGGTAAACCG
TTCCAAGAATCAGAATTGCTTGAGAATATTGAAGCATTACTTGAAACAGCTTCAGGGAGTTACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.205

100

0.613


Multiple sequence alignment