Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   M0P24_RS10425 Genome accession   NZ_CP116957
Coordinates   2045074..2045829 (-) Length   251 a.a.
NCBI ID   WP_013851388.1    Uniprot ID   F5X424
Organism   Streptococcus pasteurianus strain WUSP070     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2040074..2050829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS10410 (M0P24_10410) purC 2042814..2043524 (-) 711 WP_069789214.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  M0P24_RS10415 (M0P24_10415) - 2043648..2043890 (-) 243 WP_003062793.1 acyl carrier protein -
  M0P24_RS10420 (M0P24_10420) plsX 2043907..2044902 (-) 996 WP_287550887.1 phosphate acyltransferase PlsX -
  M0P24_RS10425 (M0P24_10425) recO 2045074..2045829 (-) 756 WP_013851388.1 DNA repair protein RecO Machinery gene
  M0P24_RS10430 (M0P24_10430) - 2045819..2046994 (-) 1176 WP_013851387.1 pyridoxal phosphate-dependent aminotransferase -
  M0P24_RS10435 (M0P24_10435) - 2047197..2048165 (-) 969 WP_003062784.1 ribose-phosphate diphosphokinase -
  M0P24_RS10440 (M0P24_10440) - 2048306..2049673 (-) 1368 WP_003062782.1 PcsB-like coiled-coil domain-containing protein -
  M0P24_RS10445 (M0P24_10445) mreD 2049775..2050281 (-) 507 WP_013851386.1 rod shape-determining protein MreD -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29204.51 Da        Isoelectric Point: 6.4980

>NTDB_id=715202 M0P24_RS10425 WP_013851388.1 2045074..2045829(-) (recO) [Streptococcus pasteurianus strain WUSP070]
MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTAAKFILKINDTGLSFIEDYKEVESFKE
INADLFRLSYASYVTALADAAVPDGVADPQLFTFVNKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGL
PFDFSHKYSGLLCPEHYGKDDYRSHLDPNVLYLVDRFQAIHFDELKTISVKPEMKRKLRLFIDDIYDNYVGLRLKSKKFI
DDLGTWGNIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=715202 M0P24_RS10425 WP_013851388.1 2045074..2045829(-) (recO) [Streptococcus pasteurianus strain WUSP070]
ATGCAAACTAAAGAAACTTATGGTCTTGTCCTCTATAATCGTAATTATCGTGAGGATGATAAGCTAGTCAAAATTTTTAC
AGAAACCAATGGGAAGCATATGTTTTTTGTTAAACATGCTGGTAAATCTCGGTTTAATTCTGTTATTCAGCCGTTAACGG
CGGCAAAATTTATTTTAAAAATTAATGATACGGGTCTGTCCTTCATTGAAGATTATAAGGAAGTTGAGTCTTTTAAGGAA
ATTAATGCAGATTTGTTTAGATTGTCCTATGCTTCTTATGTGACAGCATTGGCAGATGCAGCTGTGCCAGACGGTGTGGC
AGACCCTCAGTTGTTTACATTTGTTAATAAGACGCTTTCCTTAATGGAAGAGGGACTTGACTACGAAATTTTGACTAATA
TTTTTGAGATTCAACTTTTAGAACGATTTGGTGTTAGTCTTAATTTTCATGAATGTGCTTTTTGTCATCGGGTTGGATTG
CCCTTTGATTTTTCGCATAAATATTCTGGTCTACTTTGTCCAGAGCATTATGGTAAAGATGATTATCGTAGTCATCTTGA
TCCGAATGTGCTGTACCTGGTGGACCGATTTCAAGCCATTCATTTTGATGAATTAAAGACGATTTCAGTTAAGCCTGAGA
TGAAACGAAAATTGCGTTTATTTATTGATGATATTTATGATAATTATGTCGGTCTTCGTTTGAAAAGTAAAAAATTCATT
GATGATTTAGGGACTTGGGGAAATATTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-78)

Recombination protein O C terminal (RecO_C)

(84-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X424

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

62.948

100

0.629