Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   M0P24_RS07610 Genome accession   NZ_CP116957
Coordinates   1515901..1517559 (-) Length   552 a.a.
NCBI ID   WP_248497822.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP070     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1510901..1522559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS07585 (M0P24_07585) - 1512766..1512960 (-) 195 WP_003063769.1 hypothetical protein -
  M0P24_RS07590 (M0P24_07590) - 1513146..1513421 (-) 276 WP_003063767.1 HU family DNA-binding protein -
  M0P24_RS07595 (M0P24_07595) - 1513515..1514117 (-) 603 WP_003063750.1 YpmS family protein -
  M0P24_RS07600 (M0P24_07600) - 1514086..1514934 (-) 849 WP_003063748.1 SGNH/GDSL hydrolase family protein -
  M0P24_RS07605 (M0P24_07605) - 1514927..1515763 (-) 837 WP_013851580.1 DegV family protein -
  M0P24_RS07610 (M0P24_07610) recN 1515901..1517559 (-) 1659 WP_248497822.1 DNA repair protein RecN Machinery gene
  M0P24_RS07615 (M0P24_07615) - 1517573..1518043 (-) 471 WP_003063742.1 arginine repressor -
  M0P24_RS07620 (M0P24_07620) - 1518030..1518854 (-) 825 WP_003063741.1 TlyA family RNA methyltransferase -
  M0P24_RS07625 (M0P24_07625) - 1518847..1519716 (-) 870 WP_003063739.1 polyprenyl synthetase family protein -
  M0P24_RS07630 (M0P24_07630) - 1519716..1519931 (-) 216 WP_003063737.1 exodeoxyribonuclease VII small subunit -
  M0P24_RS07635 (M0P24_07635) xseA 1519921..1521249 (-) 1329 WP_013851578.1 exodeoxyribonuclease VII large subunit -
  M0P24_RS07640 (M0P24_07640) - 1521451..1522287 (-) 837 WP_013851577.1 NAD(P)H-hydrate dehydratase -

Sequence

Protein


Download         Length: 552 a.a.        Molecular weight: 62408.58 Da        Isoelectric Point: 4.4877

>NTDB_id=715165 M0P24_RS07610 WP_248497822.1 1515901..1517559(-) (recN) [Streptococcus pasteurianus strain WUSP070]
MLLEISIKNFAIIEEISLTFENGMTVVTGETGAGKSIIIDAMNLMLGARASLDVIRHGANKAEIEGLFSVGENPALTQIL
EENGIDVTEELIIRRDILQNGRSIGRINGQMVNLTTLRAVGQYLVDIHGQHDQEELMKPNMHIRMLDEFGNEQFADVKKH
YQELFESYRQLRKRVVTKQKNEQEHKARIEMLEFQIAEIEAATLKSGEDQVLNQKRDKLLNHKNIADTLTNAYVMLDDEE
FSSLSNIRSAMNDLMTLEEFDADYKEMSANVSEAYYILEEVTKHLGDVIDDLDFDAGSLQQIEARLEVIYSITRKYGGSV
DDVLEYYDNITKEYNLLTGNDESSDDMEKALKRLEKELIVAAEELSQERHALAKNLEAEIKQELADLYMEKADFQVQFTK
GKFNRDGNETVEFYISTNPGEGFKPLVKVASGGEISRLMLAIKSAFSRKEDKTSIVFDEVDTGVSGRVAQAIAQKIYKIG
SNGQVLAISHLPQVIAIADYQFFIEKRSDENTTVSTVRLLTEEERVEEIAKMLAGSDITEMAREQARELLKK

Nucleotide


Download         Length: 1659 bp        

>NTDB_id=715165 M0P24_RS07610 WP_248497822.1 1515901..1517559(-) (recN) [Streptococcus pasteurianus strain WUSP070]
ATGCTTTTAGAAATTTCCATTAAAAATTTTGCCATTATCGAAGAAATCTCGCTTACTTTTGAAAATGGTATGACGGTTGT
GACAGGGGAAACTGGAGCGGGGAAGTCGATTATTATTGATGCCATGAACCTCATGTTGGGGGCGCGGGCTAGTCTTGACG
TTATTCGTCATGGGGCTAACAAGGCTGAAATTGAAGGGCTTTTTTCGGTTGGTGAAAATCCTGCGCTCACACAGATTTTG
GAAGAAAATGGCATTGATGTGACAGAAGAATTGATTATTCGCCGTGACATTCTGCAAAATGGTCGTTCTATCGGTCGTAT
CAACGGACAAATGGTGAATCTGACAACGTTACGTGCAGTTGGGCAGTATCTGGTTGATATTCATGGACAACATGACCAAG
AAGAGTTGATGAAGCCCAATATGCACATTCGGATGTTGGATGAATTTGGTAATGAACAGTTTGCTGATGTCAAAAAACAT
TACCAAGAGCTTTTTGAAAGTTATCGTCAATTGCGTAAGCGTGTCGTGACCAAGCAAAAAAATGAACAAGAGCATAAAGC
GCGTATTGAAATGTTAGAATTTCAGATAGCAGAGATTGAAGCGGCAACCTTGAAATCTGGTGAGGACCAGGTACTCAATC
AAAAACGTGATAAATTGCTTAATCATAAAAACATTGCAGATACGTTGACCAATGCTTATGTCATGCTTGATGACGAAGAA
TTTTCAAGTCTATCTAACATTCGTTCAGCCATGAATGATTTGATGACGCTCGAAGAATTTGATGCTGACTATAAAGAAAT
GTCAGCTAACGTTTCAGAGGCTTATTATATCCTAGAAGAAGTCACGAAACACCTAGGTGATGTCATTGATGACCTTGATT
TTGATGCGGGAAGCTTGCAACAAATTGAAGCGCGCCTAGAGGTGATTTATAGCATTACACGCAAATATGGCGGTAGTGTT
GATGATGTTTTAGAGTATTATGATAATATCACCAAGGAATACAATCTTTTGACTGGAAATGATGAGTCATCTGATGACAT
GGAAAAAGCCCTTAAACGCTTGGAAAAAGAATTGATTGTTGCTGCTGAAGAACTCAGTCAAGAACGCCATGCCTTGGCTA
AAAATTTGGAAGCTGAAATCAAGCAAGAGTTGGCTGATTTGTACATGGAAAAGGCTGATTTTCAAGTCCAATTCACTAAA
GGAAAATTCAACCGTGATGGAAATGAAACTGTTGAATTTTACATTTCAACGAACCCTGGTGAAGGCTTTAAACCACTCGT
TAAGGTTGCGTCTGGTGGTGAAATTTCTCGTTTAATGTTGGCTATCAAATCAGCATTTTCACGTAAAGAGGACAAAACAA
GTATCGTCTTTGACGAAGTGGATACTGGTGTATCTGGTCGCGTTGCGCAAGCTATTGCCCAAAAAATCTATAAAATCGGA
AGTAACGGACAAGTCTTGGCAATATCTCATTTACCACAAGTGATTGCCATTGCTGATTATCAGTTCTTTATCGAAAAACG
CAGTGATGAAAATACGACTGTTTCAACGGTTCGCTTGTTGACCGAAGAAGAACGAGTAGAAGAAATCGCTAAAATGCTTG
CTGGTAGCGATATTACTGAAATGGCACGCGAACAAGCTCGCGAACTATTGAAGAAGTAA

Domains

Predicted by InterProScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

43.761

100

0.451