Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   M0P24_RS06405 Genome accession   NZ_CP116957
Coordinates   1266901..1267383 (-) Length   160 a.a.
NCBI ID   WP_248497778.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP070     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1261901..1272383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P24_RS06390 (M0P24_06390) kdpA 1262093..1263898 (-) 1806 WP_117575423.1 potassium-transporting ATPase subunit KdpA -
  M0P24_RS06395 (M0P24_06395) - 1264396..1265631 (-) 1236 WP_248497780.1 tetratricopeptide repeat protein -
  M0P24_RS06400 (M0P24_06400) - 1265621..1266808 (-) 1188 WP_248497779.1 AI-2E family transporter -
  M0P24_RS06405 (M0P24_06405) mutX 1266901..1267383 (-) 483 WP_248497778.1 NUDIX hydrolase Machinery gene
  M0P24_RS06410 (M0P24_06410) - 1267503..1267925 (-) 423 WP_003064219.1 HD domain-containing protein -
  M0P24_RS06415 (M0P24_06415) rfbB 1268062..1269111 (-) 1050 WP_003064218.1 dTDP-glucose 4,6-dehydratase -
  M0P24_RS06420 (M0P24_06420) - 1269286..1269879 (-) 594 WP_003064215.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  M0P24_RS06425 (M0P24_06425) rfbA 1269879..1270748 (-) 870 WP_013851675.1 glucose-1-phosphate thymidylyltransferase RfbA -
  M0P24_RS06430 (M0P24_06430) - 1270933..1271721 (-) 789 WP_248497777.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18781.08 Da        Isoelectric Point: 4.2866

>NTDB_id=715150 M0P24_RS06405 WP_248497778.1 1266901..1267383(-) (mutX) [Streptococcus pasteurianus strain WUSP070]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILDDVPFFSAKFIYDDEQRLIDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=715150 M0P24_RS06405 WP_248497778.1 1266901..1267383(-) (mutX) [Streptococcus pasteurianus strain WUSP070]
ATGACAAAATTAGCAACGATTTGTTATATTGATAATGGTGAAGCGCTTTTGCTTTTACATCGCAATAAAAAACCAAATGA
TGTTCACGAAGGAAAATGGATTTCTGTTGGTGGTAAGCTAGAAGCAGGCGAGACACCAGATGAATGTGCGAAACGTGAGA
TTTTCGAGGAAACGCATTTTACTGTTAAAGAAATGGATTTCAAGGGAGTGATTACGTTTCCAGAATTCACACCAGGGCAT
GATTGGTATACTTATGTTTTCAAGGTAACCGATTTTGAGGGAGAATTGATTTCTGATGAAGAGTCACGTGAAGGAACTTT
AGAGTGGGTGCCTTACGACCAAGTTCTATCAAAACCGACTTGGGAGGGTGACTACGAAATTTTTAAATGGATTTTGGATG
ATGTGCCATTCTTTTCAGCCAAATTTATTTATGACGACGAACAGCGCTTGATTGATAAAAGCGTGACATTTTATGATAAA
TGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

99.375

0.694