Detailed information NTG0715099

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PQH37_RS24570
• Genome accession: NZ_CP116948
• Coordinates: 5019176..5020201 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUVET21-PYO5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5014176..5025201

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQH37_RS24550 (PQH37_24460)	metJ	5015361..5015678 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PQH37_RS24555 (PQH37_24465)	yiiX	5015738..5016346 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
PQH37_RS24560 (PQH37_24470)	rpmE	5016407..5016619 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PQH37_RS24565 (PQH37_24475)	priA	5016822..5019020 (+)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
PQH37_RS24570 (PQH37_24480)	cytR	5019176..5020201 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PQH37_RS24575 (PQH37_24485)	ftsN	5020293..5021252 (+)	960	WP_000068847.1	cell division protein FtsN	-
PQH37_RS24580 (PQH37_24490)	hslV	5021345..5021875 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PQH37_RS24585 (PQH37_24495)	hslU	5021885..5023216 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PQH37_RS24590 (PQH37_24500)	menA	5023283..5024209 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PQH37_RS24595 (PQH37_24505)	rraA	5024302..5024787 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PQH37_RS24600 (PQH37_24510)	zapB	5024872..5025117 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=715099 PQH37_RS24570 WP_000644904.1 5019176..5020201(+) (cytR) [Escherichia coli strain CUVET21-PYO5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=715099 PQH37_RS24570 WP_000644904.1 5019176..5020201(+) (cytR) [Escherichia coli strain CUVET21-PYO5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628