Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NQZ90_RS08850 Genome accession   NZ_CP102148
Coordinates   1807084..1807818 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   G7SIC8
Organism   Streptococcus suis strain DNC15     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1802084..1812818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ90_RS08820 (NQZ90_08820) rnpM 1802311..1802607 (-) 297 WP_002942375.1 RNase P modulator RnpM -
  NQZ90_RS08825 (NQZ90_08825) nusA 1802624..1803766 (-) 1143 WP_004194726.1 transcription termination factor NusA -
  NQZ90_RS08830 (NQZ90_08830) rimP 1803840..1804310 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  NQZ90_RS08835 (NQZ90_08835) trmB 1804568..1805206 (-) 639 WP_203200454.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NQZ90_RS08840 (NQZ90_08840) ccrZ 1805203..1805997 (-) 795 WP_002942360.1 cell cycle regulator CcrZ -
  NQZ90_RS08845 (NQZ90_08845) - 1806047..1807087 (-) 1041 WP_024389461.1 ABC transporter permease -
  NQZ90_RS08850 (NQZ90_08850) pptA 1807084..1807818 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  NQZ90_RS08855 (NQZ90_08855) - 1807881..1808294 (+) 414 WP_257110205.1 HIT family protein -
  NQZ90_RS08860 (NQZ90_08860) - 1808296..1808598 (+) 303 WP_257110206.1 chemotaxis protein -
  NQZ90_RS08865 (NQZ90_08865) - 1808707..1809900 (-) 1194 WP_257110207.1 LCP family protein -
  NQZ90_RS08870 (NQZ90_08870) - 1809897..1810424 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  NQZ90_RS08875 (NQZ90_08875) tsaE 1810417..1810857 (-) 441 WP_306455406.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NQZ90_RS08880 (NQZ90_08880) - 1810958..1812622 (-) 1665 WP_024389465.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=715021 NQZ90_RS08850 WP_002942356.1 1807084..1807818(-) (pptA) [Streptococcus suis strain DNC15]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=715021 NQZ90_RS08850 WP_002942356.1 1807084..1807818(-) (pptA) [Streptococcus suis strain DNC15]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACAACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGGCAGATTGCAATTGACGGCCTAACTTTGCTGCAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTATTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTTAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGACTTGATCGCTCTTTTGGAGGAAGAAAAATCCAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G7SIC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721