Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NQZ91_RS10535 Genome accession   NZ_CP102145
Coordinates   2093823..2094860 (+) Length   345 a.a.
NCBI ID   WP_172022103.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 2088823..2099860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS10510 (NQZ91_10510) - 2088877..2089263 (+) 387 WP_105123528.1 rhodanese-like domain-containing protein -
  NQZ91_RS10515 (NQZ91_10515) - 2089311..2089943 (+) 633 WP_257117517.1 hypothetical protein -
  NQZ91_RS10520 (NQZ91_10520) - 2090531..2091703 (-) 1173 WP_257117518.1 IS110 family transposase -
  NQZ91_RS10525 (NQZ91_10525) rsmD 2092819..2093358 (+) 540 WP_105110455.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NQZ91_RS10530 (NQZ91_10530) coaD 2093348..2093836 (+) 489 WP_105110454.1 pantetheine-phosphate adenylyltransferase -
  NQZ91_RS10535 (NQZ91_10535) sepM 2093823..2094860 (+) 1038 WP_172022103.1 SepM family pheromone-processing serine protease Regulator
  NQZ91_RS10540 (NQZ91_10540) - 2095004..2095675 (+) 672 WP_105110452.1 YutD family protein -
  NQZ91_RS10545 (NQZ91_10545) rlmN 2095684..2096796 (+) 1113 WP_105123534.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NQZ91_RS10550 (NQZ91_10550) - 2096793..2097311 (+) 519 WP_105110450.1 VanZ family protein -
  NQZ91_RS10555 (NQZ91_10555) nadE 2097540..2098364 (-) 825 WP_257117519.1 ammonia-dependent NAD(+) synthetase -
  NQZ91_RS10560 (NQZ91_10560) - 2098376..2099836 (-) 1461 WP_105123537.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37420.56 Da        Isoelectric Point: 4.2710

>NTDB_id=714973 NQZ91_RS10535 WP_172022103.1 2093823..2094860(+) (sepM) [Streptococcus suis strain DNS20]
MKKNKGLILILSIILGVLLLWFTVFVPLPYYIESPGGAMDVQQVLTVNEEEDKKDGSYEFTYVSVQQATALQLLFAQFDP
YADITSAEEMTGGADSEEYFRIAQFYMETSQNMAKYQGLTLAKKDVEMDFFGVYVLDLAEDSTFKDVLKIADTVVSINGK
TFESSPDLIKYVSGLELGSPVTVGYVTNGQEKSADGKIIKLVNGKNGIGITLVDHTEVKSSVPIDFQTGNIGGPSAGLMF
TLAIYTQLAEPDLRDGRTIAGTGTIEQDGKVGDIGGADKKVLSAAKAGASIFFVPNNPVDKEILKENPDAKTNYEEAKEA
VEKAGVDIEVVPVKTVQDAIDYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=714973 NQZ91_RS10535 WP_172022103.1 2093823..2094860(+) (sepM) [Streptococcus suis strain DNS20]
ATGAAAAAAAATAAAGGTCTCATTTTAATTTTATCTATCATTTTAGGAGTACTCTTGCTCTGGTTTACGGTCTTTGTTCC
CCTGCCCTATTATATCGAGAGTCCTGGCGGAGCTATGGATGTGCAACAGGTCCTGACGGTTAATGAGGAAGAGGACAAGA
AGGACGGTTCTTATGAGTTTACCTATGTCTCTGTTCAGCAGGCAACGGCTCTGCAGCTGCTCTTTGCCCAATTTGATCCC
TATGCGGATATTACTTCGGCTGAGGAGATGACGGGAGGAGCAGACAGCGAGGAATATTTCCGGATTGCGCAATTTTACAT
GGAAACTTCGCAGAATATGGCCAAATACCAGGGATTAACCTTGGCCAAAAAAGATGTTGAAATGGATTTCTTTGGGGTCT
ATGTGCTTGATTTGGCGGAGGATTCGACCTTTAAGGACGTTCTCAAGATTGCGGATACGGTTGTCAGTATCAATGGCAAG
ACCTTTGAGTCGTCGCCTGATTTGATTAAGTATGTCAGCGGTTTGGAACTGGGCAGTCCTGTGACGGTGGGCTATGTGAC
AAACGGTCAGGAAAAATCAGCTGACGGTAAGATTATCAAGCTGGTCAATGGAAAAAATGGTATCGGGATTACCCTGGTGG
ACCACACAGAGGTCAAGTCCTCAGTACCTATTGACTTCCAGACGGGCAATATCGGCGGTCCTAGTGCAGGTCTCATGTTC
ACTTTGGCTATCTATACCCAGCTGGCTGAGCCAGATTTAAGGGATGGCCGGACCATTGCAGGAACGGGAACCATTGAGCA
GGACGGCAAGGTCGGCGATATTGGCGGGGCGGACAAGAAGGTCCTATCTGCTGCCAAGGCCGGTGCCAGCATCTTCTTTG
TTCCTAATAATCCTGTGGATAAGGAAATCCTAAAAGAAAATCCAGATGCCAAGACCAACTATGAGGAGGCCAAGGAGGCT
GTAGAGAAAGCGGGAGTAGACATCGAGGTCGTACCTGTCAAAACAGTCCAAGATGCCATTGATTATTTAAAGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

58.841

100

0.588