Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC   Type   Machinery gene
Locus tag   OSR41_RS13785 Genome accession   NZ_CP116941
Coordinates   2652906..2655293 (-) Length   795 a.a.
NCBI ID   WP_009327865.1    Uniprot ID   Q8VQ75
Organism   Bacillus licheniformis strain GN02     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2647906..2660293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSR41_RS13755 (OSR41_13755) - 2648175..2648498 (-) 324 WP_003183676.1 YqxA family protein -
  OSR41_RS13760 (OSR41_13760) spoIIP 2648514..2649719 (-) 1206 WP_003183678.1 stage II sporulation protein P -
  OSR41_RS13765 (OSR41_13765) gpr 2649838..2650944 (-) 1107 WP_003183680.1 GPR endopeptidase -
  OSR41_RS13770 (OSR41_13770) rpsT 2651149..2651415 (+) 267 WP_003183682.1 30S ribosomal protein S20 -
  OSR41_RS13775 (OSR41_13775) holA 2651477..2652520 (-) 1044 WP_003183684.1 DNA polymerase III subunit delta -
  OSR41_RS13780 (OSR41_13780) - 2652750..2652881 (+) 132 WP_003183686.1 YqzM family protein -
  OSR41_RS13785 (OSR41_13785) comEC 2652906..2655293 (-) 2388 WP_009327865.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  OSR41_RS13790 (OSR41_13790) - 2655297..2655866 (-) 570 WP_003183690.1 ComE operon protein 2 -
  OSR41_RS13795 (OSR41_13795) comEA 2655935..2656564 (-) 630 WP_003183693.1 helix-hairpin-helix domain-containing protein Machinery gene
  OSR41_RS13800 (OSR41_13800) comER 2656648..2657469 (+) 822 WP_003183696.1 late competence protein ComER -
  OSR41_RS13805 (OSR41_13805) - 2657539..2658294 (-) 756 WP_003183697.1 class I SAM-dependent DNA methyltransferase -
  OSR41_RS13810 (OSR41_13810) rsfS 2658291..2658647 (-) 357 WP_003183699.1 ribosome silencing factor -
  OSR41_RS13815 (OSR41_13815) yqeK 2658661..2659224 (-) 564 WP_003183701.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  OSR41_RS13820 (OSR41_13820) - 2659214..2659783 (-) 570 WP_003183702.1 nicotinate-nucleotide adenylyltransferase -
  OSR41_RS13825 (OSR41_13825) yhbY 2659802..2660092 (-) 291 WP_003183704.1 ribosome assembly RNA-binding protein YhbY -

Sequence

Protein


Download         Length: 795 a.a.        Molecular weight: 87815.76 Da        Isoelectric Point: 8.3336

>NTDB_id=714972 OSR41_RS13785 WP_009327865.1 2652906..2655293(-) (comEC) [Bacillus licheniformis strain GN02]
MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFKKQILLFALCAAVCILYFTSFYVIDHFNTTIYHEGKFH
TLASVQDIPVIDGDRLSFTAETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQGELKEPKKETVPGTFNQKESMYQKG
IHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMADSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLH
VGLLSAALFYIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLSKKNFKSADVISIACLGLLLYH
PYLLFQAGFQLSFAVSFVFILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMPL
SFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIP
SGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDFSLGESVLMPFLAT
KGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVPKGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLS
PKEADKNSKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHGSKGSTGEELIKQIEPKTALISAG
EHNRYGHPHGEVLDILNRHDVKVFRTDRHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE

Nucleotide


Download         Length: 2388 bp        

>NTDB_id=714972 OSR41_RS13785 WP_009327865.1 2652906..2655293(-) (comEC) [Bacillus licheniformis strain GN02]
ATGGACAGACATCGCATCTTCCCGTGCGGAGCGATTTCAGCGGCAGCCGGAATCGCCTCCGCTCACTCTTCTCTTTATCT
CTTCCTCGCCGTCGGTTTTTTTCTGTTCTTTATCCTCTGTTTCTTCAAAAAACAAATACTCCTTTTCGCTTTATGTGCAG
CGGTTTGTATTTTATATTTTACTTCTTTTTACGTGATCGACCATTTCAATACAACGATTTATCATGAAGGCAAATTTCAC
ACGCTCGCTTCTGTTCAGGATATTCCCGTAATAGACGGAGACCGGCTTTCTTTCACAGCCGAAACAGATGAGGGAGAAGC
TTTGAAAGCGGGATATACGCTCCGGTCTCCACAAGAAAAACGGGCGCTCTCAGCTCTTCAGCCGGGCAGCCTCTGTGTCA
TGCAAGGTGAATTAAAAGAGCCGAAAAAAGAGACGGTTCCTGGCACTTTTAATCAAAAAGAATCCATGTATCAAAAAGGG
ATTCACTGGATTTTTGCAGTTCAGTCTATTACAAGCTGCAAGCCGGGCGGCGGCCTGATGCCATCTCTATTGAAAATCAG
AAAAGCGGGCCTTGATTTTATAGAGGAAAATATGGCGGACTCGGCTGCCGGTATTGGAAGAGCGCTAATTTTCGGAGACC
GGTTTCTCATTGAACAAGATGTCCTGGACGGCTATCAGCGTCTTGGAATCATTCACCTTTTAGCGATTTCCGGGCTTCAT
GTCGGTCTGCTCTCAGCCGCTCTGTTTTACATATTTATTCGCTTCGGCGTCACGAGGGAATGCGCAAAATGGCTGCTCGT
GATCGGCCTTCCCGTTGCCGCAGTTTTGACCGGAGGCGCCCCGTCGGTGATGAGAGCGGTTTTCATGTCTGAAATCTATC
TGCTGGCATCACTGTCTAAAAAGAACTTCAAAAGTGCCGATGTGATCAGCATTGCCTGCCTCGGACTGCTGCTGTATCAT
CCTTATCTGTTATTTCAAGCCGGATTCCAGCTTTCTTTTGCTGTATCCTTCGTTTTCATTCTTTCAAAGGAGATATTGAC
CAGGCCGAAAAGCCGAATCTCTCAGCTGCTATTGGGGTCATTTTTGGCTCAGCTCGCTTCCCTCCCGATTCTGCTTTTTC
ATTTTCAAGAGTTTTCATTTCTCAGCACATTAATGAATCTATTTTTTATACCTCTTTATATTTTCATCATCATGCCGCTG
TCTTTCGGAAGCCTGCTTGCTTTCATATGTTTTCATCCCTTGGGGGAGGCGGCAGCCGCCGTTCTTGACCGTCTGCTTGT
GTGGAGCCATCAGGCTGTTAAAACGGTGTCTGCCGCGGATGTTTCGGTCTTTTCTGCGGCTAAGCCGCCGGATCTTTTGT
TGTTTTTCTACTTCACAGCCATTTTTCTGTTTTTGCTGTTGCTGGAAAAAGAGATGTCGCTTCGTGCGGTCATGATTCCG
TCCGGCCTGCTTGCTGCTGTGTTTGTGATTCACGCATGTCTTCCTCAGCTTGCAGGTGAGGGAGAGGTTACAATGCTTGA
TATCGGCCAAGGGGACAGCATGTATGTCAGCGCTCCCGGTCAGAATGGCACGGTCTTCATTGATACGGGAGGAACCGTAT
CCTTCCGGAAAGAGCGGTGGAGAAAGCGGAAGAAGGATTTTTCATTGGGGGAGAGCGTGTTAATGCCTTTTCTGGCAACC
AAAGGGGTCAAGAAGCTCGATGCTTTAATTTTGACCCATGCTGATCAGGATCATATCGGTGAAGCGCATGTGCTGATCCA
AAAACATAAAGTGAAGCAATTGATCGTGCCGAAAGGCTTCGCAGCCGAACCGTCTGATGAAAAGCTGCTTCGCCTTGCCT
TGAAGGAAGGCGTCGAGGTGAATGTAGCCAAAAGAGGTGACATCCTTCATATTGGCAATCTTGAATTTTATGTTCTTTCA
CCGAAAGAGGCGGACAAAAACAGCAAAAACAATGGTTCCCTCGTATTGTGGATGAAAGCAGGCGGATTTTCGTGGCTGTT
AACTGGAGATTTGGAGAAGGAGGGCGAAAAGGAGATGATGGAAGTGTATCCGAATCTTAAAGCGGATATTCTGAAAGTCG
GTCACCATGGAAGCAAAGGTTCGACGGGTGAAGAGCTGATCAAGCAAATTGAGCCGAAAACCGCCCTCATTTCGGCGGGG
GAGCACAACCGCTACGGGCATCCCCACGGGGAAGTGCTGGACATCCTAAACCGCCACGATGTGAAGGTGTTCAGAACGGA
TCGGCACGGTTCGATTCAGCACCTATTTCGAGGCGGGAACGGAACGTTTTTGCTACATCCTCCATATGATAAAGTACATT
CCCCGCAAGAAAAAATGACTGCTGAAAAACAGCAGTCGTCAAAAAGCCGCTTGCCTGACGGAGAGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(509-720)

Competence protein (Competence)

(209-470)

Domain of unknown function (DUF4131) (DUF4131)

(24-171)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ75

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC Bacillus subtilis subsp. subtilis str. 168

48.235

96.226

0.464