Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NQZ91_RS09145 Genome accession   NZ_CP102145
Coordinates   1823278..1824012 (+) Length   244 a.a.
NCBI ID   WP_257104845.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1818278..1829012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS09115 (NQZ91_09115) - 1818325..1819785 (+) 1461 WP_257117401.1 NCS2 family permease -
  NQZ91_RS09120 (NQZ91_09120) tsaE 1819870..1820310 (+) 441 WP_172062408.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NQZ91_RS09125 (NQZ91_09125) - 1820303..1820827 (+) 525 WP_257118060.1 GNAT family N-acetyltransferase -
  NQZ91_RS09130 (NQZ91_09130) - 1820827..1822026 (+) 1200 WP_257117402.1 LCP family protein -
  NQZ91_RS09135 (NQZ91_09135) - 1822486..1822800 (-) 315 WP_105111603.1 chemotaxis protein -
  NQZ91_RS09140 (NQZ91_09140) - 1822803..1823216 (-) 414 WP_105160222.1 HIT family protein -
  NQZ91_RS09145 (NQZ91_09145) pptA 1823278..1824012 (+) 735 WP_257104845.1 ABC transporter ATP-binding protein Regulator
  NQZ91_RS09150 (NQZ91_09150) - 1824009..1825055 (+) 1047 WP_257104844.1 ABC transporter permease -
  NQZ91_RS09155 (NQZ91_09155) - 1825105..1825899 (+) 795 WP_172062316.1 phosphotransferase family protein -
  NQZ91_RS09160 (NQZ91_09160) trmB 1825896..1826531 (+) 636 WP_105111608.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NQZ91_RS09165 (NQZ91_09165) rimP 1826692..1827162 (+) 471 WP_257117403.1 ribosome maturation factor RimP -
  NQZ91_RS09170 (NQZ91_09170) nusA 1827212..1828354 (+) 1143 WP_125266113.1 transcription termination factor NusA -
  NQZ91_RS09175 (NQZ91_09175) rnpM 1828371..1828667 (+) 297 WP_105111611.1 RNase P modulator RnpM -
  NQZ91_RS09180 (NQZ91_09180) - 1828624..1828962 (+) 339 WP_257117405.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27068.46 Da        Isoelectric Point: 4.5525

>NTDB_id=714965 NQZ91_RS09145 WP_257104845.1 1823278..1824012(+) (pptA) [Streptococcus suis strain DNS20]
MLEVKNITGGYANIPVLHDVDFKVRDGELVGLIGLNGAGKSTTIKEIIGLLSPYKGEILIDGQGINEDMATYRKKIGFIP
ETPSLYEELTLKEHIELVMMAYDLEAESAWARVQELLAIFRLEDRLDWFPVNFSKGMKQKVMIICALMVEPSLLIVDEPF
LGLDPIAIADLINLLNQAKAQGSSILMSTHVLDSAEKMCDRFVILHKGRVKATGNLTDLRQEFAMQDASLNEIYLSLTQE
GGQG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=714965 NQZ91_RS09145 WP_257104845.1 1823278..1824012(+) (pptA) [Streptococcus suis strain DNS20]
ATGTTAGAAGTAAAAAATATAACAGGTGGCTATGCCAATATTCCTGTTTTACATGATGTAGATTTTAAGGTGAGGGATGG
GGAGCTAGTCGGCTTGATTGGCTTGAATGGTGCCGGGAAATCGACCACTATTAAAGAAATCATCGGTCTCCTAAGCCCTT
ACAAGGGAGAAATTCTAATTGATGGGCAGGGGATCAACGAAGACATGGCTACCTATCGAAAAAAAATTGGTTTTATACCT
GAAACGCCTAGTCTCTATGAGGAACTGACCCTGAAAGAGCATATCGAGTTAGTGATGATGGCCTATGATTTGGAAGCTGA
ATCTGCCTGGGCGCGTGTTCAAGAACTATTGGCTATTTTTAGGCTGGAAGACCGTTTGGACTGGTTCCCTGTGAATTTTT
CAAAAGGCATGAAACAAAAGGTCATGATTATTTGCGCCCTTATGGTTGAACCGAGTTTGCTGATTGTCGATGAACCTTTC
TTGGGTCTGGATCCGATTGCGATTGCGGATTTAATTAACTTGCTCAATCAAGCAAAGGCTCAGGGAAGCTCCATTTTGAT
GTCCACCCATGTTCTCGATTCCGCTGAAAAAATGTGTGATCGGTTCGTTATCCTACATAAGGGTCGGGTCAAGGCTACGG
GCAATCTGACTGACCTACGCCAGGAATTTGCCATGCAGGATGCTAGCCTTAACGAGATTTATCTTAGTTTGACCCAAGAA
GGAGGGCAGGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

69.038

97.951

0.676
  pptA Streptococcus salivarius strain HSISS4

69.038

97.951

0.676