Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NQZ91_RS06220 | Genome accession | NZ_CP102145 |
| Coordinates | 1267941..1270391 (-) | Length | 816 a.a. |
| NCBI ID | WP_105111715.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain DNS20 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1262941..1275391
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ91_RS06195 (NQZ91_06195) | hslO | 1263089..1263955 (+) | 867 | WP_257117146.1 | Hsp33 family molecular chaperone HslO | - |
| NQZ91_RS06200 (NQZ91_06200) | dusB | 1263948..1264952 (+) | 1005 | WP_105138349.1 | tRNA dihydrouridine synthase DusB | - |
| NQZ91_RS06205 (NQZ91_06205) | - | 1265138..1265962 (+) | 825 | WP_257117147.1 | C39 family peptidase | - |
| NQZ91_RS06210 (NQZ91_06210) | pnuC | 1266024..1266827 (-) | 804 | WP_105111713.1 | nicotinamide riboside transporter PnuC | - |
| NQZ91_RS06215 (NQZ91_06215) | - | 1266843..1267880 (-) | 1038 | WP_257117149.1 | AAA family ATPase | - |
| NQZ91_RS06220 (NQZ91_06220) | clpC | 1267941..1270391 (-) | 2451 | WP_105111715.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| NQZ91_RS06225 (NQZ91_06225) | - | 1270396..1270854 (-) | 459 | WP_105111716.1 | CtsR family transcriptional regulator | - |
| NQZ91_RS06230 (NQZ91_06230) | - | 1271034..1271294 (-) | 261 | WP_257103993.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| NQZ91_RS06235 (NQZ91_06235) | relB | 1271296..1271517 (-) | 222 | WP_172009559.1 | type II toxin-antitoxin system RelB family antitoxin | - |
| NQZ91_RS06240 (NQZ91_06240) | - | 1271797..1272132 (+) | 336 | WP_257103992.1 | thiol reductase thioredoxin | - |
| NQZ91_RS06245 (NQZ91_06245) | purR | 1272253..1273071 (-) | 819 | WP_105111720.1 | pur operon repressor | - |
| NQZ91_RS06250 (NQZ91_06250) | - | 1273163..1274047 (-) | 885 | WP_257117150.1 | aminoglycoside phosphotransferase family protein | - |
| NQZ91_RS06255 (NQZ91_06255) | - | 1274044..1274988 (-) | 945 | WP_257103990.1 | 3'-5' exoribonuclease YhaM family protein | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 89847.39 Da Isoelectric Point: 6.6639
>NTDB_id=714940 NQZ91_RS06220 WP_105111715.1 1267941..1270391(-) (clpC) [Streptococcus suis strain DNS20]
MNISKGLKRVFEDAQLIAQRYSSDLLETWHVLLAFVINQDTVAGAVLADYPPSVADYEHATFVVTEKVYQEDIESFKILP
SSKRLDEKAANAKTIAQAVKAKEVGTEHLFLAMLLDKKTVASQILDKVGFHHEDSDDKIRLLDLRKNLETRAGFNKEDLK
AIRLALKGRKAPQQTMGQMMGGGMPQPQTGGLEDYTRDLTALAREGKMEPVIGRDTEISRMVQILSRKTKNNPVLVGDAG
VGKTALALGLAQRIASGDVPPSLAKMRVLELDLMSVVSGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGI
DSTMDAANILKPALARGTLRTLGATTQSEYQKHIEKDAALVRRFAKVIIEEPTVADSIAILAGLKGTFEKYHRVQITDSA
VETAVTYAKRYLTSKRLPDSAIDLLDESAARVQNRVKGQPVATGLTVLDQALMAGKYKTVSKLLLAEKEAVKAGQGYDLE
VTEADILETLSRLSGIPVQKLSQTDAKKYLNLEAELHKRVIGQDQAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVL
LQVLDDGVLTDNKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEELKKAYRPEFINRIDEKVV
FHSLSEADMQDIVKVMVQPLIAITAERGLTLKLQPSALKLLATEGYDPEMGARPLRRLLQTKLEDSLAEMLLRGDLVGGQ
TLKVGVKAGQLKFDIV
MNISKGLKRVFEDAQLIAQRYSSDLLETWHVLLAFVINQDTVAGAVLADYPPSVADYEHATFVVTEKVYQEDIESFKILP
SSKRLDEKAANAKTIAQAVKAKEVGTEHLFLAMLLDKKTVASQILDKVGFHHEDSDDKIRLLDLRKNLETRAGFNKEDLK
AIRLALKGRKAPQQTMGQMMGGGMPQPQTGGLEDYTRDLTALAREGKMEPVIGRDTEISRMVQILSRKTKNNPVLVGDAG
VGKTALALGLAQRIASGDVPPSLAKMRVLELDLMSVVSGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGI
DSTMDAANILKPALARGTLRTLGATTQSEYQKHIEKDAALVRRFAKVIIEEPTVADSIAILAGLKGTFEKYHRVQITDSA
VETAVTYAKRYLTSKRLPDSAIDLLDESAARVQNRVKGQPVATGLTVLDQALMAGKYKTVSKLLLAEKEAVKAGQGYDLE
VTEADILETLSRLSGIPVQKLSQTDAKKYLNLEAELHKRVIGQDQAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVG
KTELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVL
LQVLDDGVLTDNKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSKSQEHVEKRIFEELKKAYRPEFINRIDEKVV
FHSLSEADMQDIVKVMVQPLIAITAERGLTLKLQPSALKLLATEGYDPEMGARPLRRLLQTKLEDSLAEMLLRGDLVGGQ
TLKVGVKAGQLKFDIV
Nucleotide
Download Length: 2451 bp
>NTDB_id=714940 NQZ91_RS06220 WP_105111715.1 1267941..1270391(-) (clpC) [Streptococcus suis strain DNS20]
ATGAATATTTCAAAGGGATTGAAACGGGTCTTTGAGGATGCCCAGCTGATTGCCCAACGTTATAGTAGTGATTTGTTGGA
GACCTGGCATGTGCTCTTGGCCTTTGTTATCAACCAAGATACGGTGGCTGGAGCGGTTCTGGCAGATTATCCACCTAGTG
TGGCAGACTATGAGCATGCTACCTTTGTCGTGACCGAAAAAGTCTATCAGGAGGACATAGAGTCCTTCAAGATTTTGCCG
TCGTCCAAGCGTTTGGATGAGAAGGCAGCCAATGCCAAAACCATTGCGCAGGCCGTCAAGGCTAAGGAAGTAGGAACAGA
GCATCTTTTCCTAGCCATGCTTTTGGACAAGAAAACAGTGGCCAGTCAGATTTTGGACAAGGTTGGTTTTCACCATGAAG
ACTCGGATGATAAGATTCGCCTGCTAGATTTGCGGAAAAATCTTGAGACCCGTGCAGGCTTCAACAAGGAAGATCTTAAG
GCCATTCGTCTGGCCTTGAAGGGGCGCAAGGCTCCTCAACAGACCATGGGGCAGATGATGGGTGGCGGTATGCCTCAGCC
CCAGACAGGTGGTTTGGAAGATTACACCCGTGACTTGACTGCCTTGGCTCGTGAAGGCAAGATGGAGCCTGTTATCGGTC
GTGATACTGAGATTTCGCGTATGGTGCAGATTTTATCGCGCAAGACCAAGAATAATCCTGTCTTGGTCGGTGATGCGGGT
GTCGGGAAAACAGCCCTGGCCCTGGGACTTGCTCAGCGTATAGCGTCGGGAGATGTTCCGCCTAGTCTGGCTAAGATGCG
GGTCTTGGAGCTGGATTTGATGAGTGTGGTTTCTGGGACCCGTTTCCGTGGGGATTTTGAGGAGCGGATGAACAATATCA
TAAACGACATCGAAGAAGATGGTCAGGTGATTCTTTTCATCGATGAGCTTCATACTATTATGGGCTCTGGTTCTGGGATT
GATTCGACCATGGATGCGGCCAATATCCTCAAGCCTGCTCTGGCGCGTGGCACTCTGCGGACGCTTGGTGCGACGACCCA
GTCGGAATATCAGAAACATATCGAAAAGGATGCTGCTCTGGTTCGCCGTTTTGCCAAGGTCATCATCGAAGAGCCAACAG
TGGCGGACAGCATTGCCATTTTGGCAGGTCTCAAAGGGACTTTTGAAAAATACCACAGGGTCCAAATCACAGATAGTGCT
GTAGAGACGGCCGTGACCTATGCCAAGCGATATTTGACTAGCAAACGCCTGCCGGATTCAGCAATTGACTTACTAGACGA
ATCAGCGGCAAGGGTGCAGAACCGTGTCAAGGGTCAGCCAGTTGCGACAGGCTTGACAGTCCTTGACCAGGCCCTCATGG
CTGGCAAATACAAAACGGTCAGCAAGCTCCTCCTGGCTGAGAAAGAGGCTGTTAAAGCCGGCCAAGGTTACGACTTAGAA
GTGACGGAGGCAGATATTTTGGAGACCCTCAGTCGCCTGTCGGGTATTCCAGTGCAGAAACTCAGCCAGACAGATGCCAA
GAAATACCTGAACCTGGAAGCAGAACTCCACAAGCGGGTCATCGGTCAGGACCAGGCCATCTCAGCCGTCAGCAGAGCCA
TTCGACGCAATCAGTCTGGCATTCGGACCGGTCGCCGTCCAATCGGTTCCTTTATGTTCCTGGGGCCAACAGGTGTCGGC
AAGACCGAGCTGGCTAAGGCCCTGGCAGAAGTCCTCTTTGATGATGAGTCGGCACTAATCCGCTTTGATATGTCCGAGTA
TATGGAGAAATTTGCGGCCAGCCGCCTCAACGGTGCGCCTCCAGGCTATGTTGGCTATGAAGAGGGTGGCGAGTTGACGG
AAAAAGTCCGCAACAAGCCTTACTCTGTCCTTCTCTTTGACGAGGTTGAAAAGGCCCACCCAGATATTTTCAATGTCCTC
CTCCAGGTCTTGGACGACGGTGTCTTGACAGACAACAAGGGGCGTAAGGTAGATTTCTCTAATACGATTATTATCATGAC
CTCCAACCTTGGGGCAACTGCCCTGAGGGACGACAAGACGGTTGGTTTTGGTGCCCTTGATTTGTCCAAGAGCCAGGAGC
ATGTGGAAAAACGGATTTTCGAGGAATTGAAAAAGGCCTACCGCCCAGAGTTTATCAACCGTATTGATGAAAAGGTTGTC
TTCCACAGCCTATCTGAAGCGGATATGCAGGATATTGTCAAGGTCATGGTGCAGCCGCTGATAGCTATCACGGCCGAGCG
TGGTCTGACCCTCAAGTTGCAACCGTCTGCTCTCAAACTCCTAGCGACAGAAGGCTACGATCCAGAAATGGGTGCCCGTC
CGCTCCGCCGTCTCTTGCAGACCAAGCTGGAAGATTCATTGGCAGAAATGCTCTTGCGTGGTGACCTGGTTGGCGGTCAA
ACCCTTAAAGTGGGCGTCAAAGCTGGCCAATTGAAATTTGACATAGTGTAA
ATGAATATTTCAAAGGGATTGAAACGGGTCTTTGAGGATGCCCAGCTGATTGCCCAACGTTATAGTAGTGATTTGTTGGA
GACCTGGCATGTGCTCTTGGCCTTTGTTATCAACCAAGATACGGTGGCTGGAGCGGTTCTGGCAGATTATCCACCTAGTG
TGGCAGACTATGAGCATGCTACCTTTGTCGTGACCGAAAAAGTCTATCAGGAGGACATAGAGTCCTTCAAGATTTTGCCG
TCGTCCAAGCGTTTGGATGAGAAGGCAGCCAATGCCAAAACCATTGCGCAGGCCGTCAAGGCTAAGGAAGTAGGAACAGA
GCATCTTTTCCTAGCCATGCTTTTGGACAAGAAAACAGTGGCCAGTCAGATTTTGGACAAGGTTGGTTTTCACCATGAAG
ACTCGGATGATAAGATTCGCCTGCTAGATTTGCGGAAAAATCTTGAGACCCGTGCAGGCTTCAACAAGGAAGATCTTAAG
GCCATTCGTCTGGCCTTGAAGGGGCGCAAGGCTCCTCAACAGACCATGGGGCAGATGATGGGTGGCGGTATGCCTCAGCC
CCAGACAGGTGGTTTGGAAGATTACACCCGTGACTTGACTGCCTTGGCTCGTGAAGGCAAGATGGAGCCTGTTATCGGTC
GTGATACTGAGATTTCGCGTATGGTGCAGATTTTATCGCGCAAGACCAAGAATAATCCTGTCTTGGTCGGTGATGCGGGT
GTCGGGAAAACAGCCCTGGCCCTGGGACTTGCTCAGCGTATAGCGTCGGGAGATGTTCCGCCTAGTCTGGCTAAGATGCG
GGTCTTGGAGCTGGATTTGATGAGTGTGGTTTCTGGGACCCGTTTCCGTGGGGATTTTGAGGAGCGGATGAACAATATCA
TAAACGACATCGAAGAAGATGGTCAGGTGATTCTTTTCATCGATGAGCTTCATACTATTATGGGCTCTGGTTCTGGGATT
GATTCGACCATGGATGCGGCCAATATCCTCAAGCCTGCTCTGGCGCGTGGCACTCTGCGGACGCTTGGTGCGACGACCCA
GTCGGAATATCAGAAACATATCGAAAAGGATGCTGCTCTGGTTCGCCGTTTTGCCAAGGTCATCATCGAAGAGCCAACAG
TGGCGGACAGCATTGCCATTTTGGCAGGTCTCAAAGGGACTTTTGAAAAATACCACAGGGTCCAAATCACAGATAGTGCT
GTAGAGACGGCCGTGACCTATGCCAAGCGATATTTGACTAGCAAACGCCTGCCGGATTCAGCAATTGACTTACTAGACGA
ATCAGCGGCAAGGGTGCAGAACCGTGTCAAGGGTCAGCCAGTTGCGACAGGCTTGACAGTCCTTGACCAGGCCCTCATGG
CTGGCAAATACAAAACGGTCAGCAAGCTCCTCCTGGCTGAGAAAGAGGCTGTTAAAGCCGGCCAAGGTTACGACTTAGAA
GTGACGGAGGCAGATATTTTGGAGACCCTCAGTCGCCTGTCGGGTATTCCAGTGCAGAAACTCAGCCAGACAGATGCCAA
GAAATACCTGAACCTGGAAGCAGAACTCCACAAGCGGGTCATCGGTCAGGACCAGGCCATCTCAGCCGTCAGCAGAGCCA
TTCGACGCAATCAGTCTGGCATTCGGACCGGTCGCCGTCCAATCGGTTCCTTTATGTTCCTGGGGCCAACAGGTGTCGGC
AAGACCGAGCTGGCTAAGGCCCTGGCAGAAGTCCTCTTTGATGATGAGTCGGCACTAATCCGCTTTGATATGTCCGAGTA
TATGGAGAAATTTGCGGCCAGCCGCCTCAACGGTGCGCCTCCAGGCTATGTTGGCTATGAAGAGGGTGGCGAGTTGACGG
AAAAAGTCCGCAACAAGCCTTACTCTGTCCTTCTCTTTGACGAGGTTGAAAAGGCCCACCCAGATATTTTCAATGTCCTC
CTCCAGGTCTTGGACGACGGTGTCTTGACAGACAACAAGGGGCGTAAGGTAGATTTCTCTAATACGATTATTATCATGAC
CTCCAACCTTGGGGCAACTGCCCTGAGGGACGACAAGACGGTTGGTTTTGGTGCCCTTGATTTGTCCAAGAGCCAGGAGC
ATGTGGAAAAACGGATTTTCGAGGAATTGAAAAAGGCCTACCGCCCAGAGTTTATCAACCGTATTGATGAAAAGGTTGTC
TTCCACAGCCTATCTGAAGCGGATATGCAGGATATTGTCAAGGTCATGGTGCAGCCGCTGATAGCTATCACGGCCGAGCG
TGGTCTGACCCTCAAGTTGCAACCGTCTGCTCTCAAACTCCTAGCGACAGAAGGCTACGATCCAGAAATGGGTGCCCGTC
CGCTCCGCCGTCTCTTGCAGACCAAGCTGGAAGATTCATTGGCAGAAATGCTCTTGCGTGGTGACCTGGTTGGCGGTCAA
ACCCTTAAAGTGGGCGTCAAAGCTGGCCAATTGAAATTTGACATAGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
72.549 |
100 |
0.725 |
| clpC | Streptococcus pneumoniae Rx1 |
72.549 |
100 |
0.725 |
| clpC | Streptococcus pneumoniae D39 |
72.549 |
100 |
0.725 |
| clpC | Streptococcus mutans UA159 |
67.159 |
99.632 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.606 |
100 |
0.653 |
| clpC | Streptococcus thermophilus LMD-9 |
64.606 |
100 |
0.653 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.13 |
100 |
0.489 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.728 |
100 |
0.449 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.191 |
80.27 |
0.363 |