Detailed information
Bioinformatically predicted
Overview
| Name | treR | Type | Regulator |
| Locus tag | NQZ92_RS01240 | Genome accession | NZ_CP102143 |
| Coordinates | 222653..223366 (+) | Length | 237 a.a. |
| NCBI ID | WP_012774930.1 | Uniprot ID | A0A142UPI2 |
| Organism | Streptococcus suis strain DNR43 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 206426..252449 | 222653..223366 | within | 0 |
Gene organization within MGE regions
Location: 206426..252449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ92_RS01170 (NQZ92_01170) | - | 206426..207370 (+) | 945 | WP_226960621.1 | IS30 family transposase | - |
| NQZ92_RS01175 (NQZ92_01175) | - | 207429..208457 (+) | 1029 | WP_002935967.1 | ABC transporter substrate-binding protein | - |
| NQZ92_RS01180 (NQZ92_01180) | - | 208551..209360 (+) | 810 | WP_002935966.1 | hypothetical protein | - |
| NQZ92_RS11250 | - | 209533..211594 (+) | 2062 | Protein_200 | heavy metal translocating P-type ATPase | - |
| NQZ92_RS01205 (NQZ92_01205) | - | 211633..214122 (-) | 2490 | WP_024409301.1 | ATP-dependent RecD-like DNA helicase | - |
| NQZ92_RS01210 (NQZ92_01210) | lepB | 214186..214815 (-) | 630 | WP_002935959.1 | signal peptidase I | - |
| NQZ92_RS01215 (NQZ92_01215) | rnhC | 214825..215715 (-) | 891 | WP_013730101.1 | ribonuclease HIII | - |
| NQZ92_RS01220 (NQZ92_01220) | - | 215800..216783 (+) | 984 | WP_009909178.1 | Gfo/Idh/MocA family protein | - |
| NQZ92_RS01225 (NQZ92_01225) | - | 217132..218307 (+) | 1176 | WP_013730102.1 | LysM domain-containing protein | - |
| NQZ92_RS01230 (NQZ92_01230) | treC | 218720..220345 (-) | 1626 | WP_009909185.1 | alpha,alpha-phosphotrehalase | - |
| NQZ92_RS01235 (NQZ92_01235) | treP | 220426..222420 (-) | 1995 | WP_002935953.1 | PTS system trehalose-specific EIIBC component | - |
| NQZ92_RS01240 (NQZ92_01240) | treR | 222653..223366 (+) | 714 | WP_012774930.1 | trehalose operon repressor | Regulator |
| NQZ92_RS01245 (NQZ92_01245) | - | 223424..223735 (+) | 312 | WP_002935948.1 | hypothetical protein | - |
| NQZ92_RS01250 (NQZ92_01250) | - | 223732..224280 (+) | 549 | WP_002935945.1 | CvpA family protein | - |
| NQZ92_RS01255 (NQZ92_01255) | - | 224831..227164 (+) | 2334 | WP_002935942.1 | endonuclease MutS2 | - |
| NQZ92_RS01260 (NQZ92_01260) | - | 227330..227722 (+) | 393 | WP_014636774.1 | DUF1310 family protein | - |
| NQZ92_RS01265 (NQZ92_01265) | - | 227715..227978 (+) | 264 | WP_022540536.1 | hypothetical protein | - |
| NQZ92_RS01270 (NQZ92_01270) | - | 228004..228381 (+) | 378 | WP_002935940.1 | DUF1310 family protein | - |
| NQZ92_RS01275 (NQZ92_01275) | - | 228428..228685 (+) | 258 | WP_002935939.1 | hypothetical protein | - |
| NQZ92_RS01280 (NQZ92_01280) | - | 228780..229169 (+) | 390 | WP_002935938.1 | DUF1310 family protein | - |
| NQZ92_RS01285 (NQZ92_01285) | - | 229162..230412 (+) | 1251 | WP_002935930.1 | Mbeg1-like protein | - |
| NQZ92_RS01290 (NQZ92_01290) | - | 230514..230891 (+) | 378 | WP_024390453.1 | DUF1310 family protein | - |
| NQZ92_RS01295 (NQZ92_01295) | - | 230894..231196 (+) | 303 | WP_029694155.1 | hypothetical protein | - |
| NQZ92_RS01300 (NQZ92_01300) | - | 231291..231671 (+) | 381 | WP_002935927.1 | DUF1310 family protein | - |
| NQZ92_RS01305 (NQZ92_01305) | - | 231678..232940 (+) | 1263 | WP_002935926.1 | triacylglycerol lipase | - |
| NQZ92_RS01310 (NQZ92_01310) | - | 232919..233305 (+) | 387 | WP_002935925.1 | hypothetical protein | - |
| NQZ92_RS01315 (NQZ92_01315) | - | 233318..233638 (+) | 321 | WP_002935924.1 | hypothetical protein | - |
| NQZ92_RS01320 (NQZ92_01320) | trxA | 233878..234192 (+) | 315 | WP_002935923.1 | thioredoxin | - |
| NQZ92_RS11260 | - | 234285..234335 (-) | 51 | WP_353735889.1 | hypothetical protein | - |
| NQZ92_RS01325 (NQZ92_01325) | - | 234325..235854 (+) | 1530 | WP_009909192.1 | AMP-binding protein | - |
| NQZ92_RS01330 (NQZ92_01330) | msrB | 235894..236835 (+) | 942 | WP_009909193.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
| NQZ92_RS01335 (NQZ92_01335) | - | 237027..237371 (+) | 345 | WP_014636777.1 | hypothetical protein | - |
| NQZ92_RS01340 (NQZ92_01340) | - | 237368..237601 (+) | 234 | WP_002935912.1 | hypothetical protein | - |
| NQZ92_RS01345 (NQZ92_01345) | - | 237679..238089 (+) | 411 | WP_002935911.1 | hypothetical protein | - |
| NQZ92_RS01350 (NQZ92_01350) | - | 238089..238364 (+) | 276 | WP_002935908.1 | hypothetical protein | - |
| NQZ92_RS01355 (NQZ92_01355) | - | 238390..238791 (+) | 402 | WP_014636783.1 | hypothetical protein | - |
| NQZ92_RS01360 (NQZ92_01360) | - | 238788..240002 (+) | 1215 | WP_002935904.1 | alpha/beta fold hydrolase | - |
| NQZ92_RS01365 (NQZ92_01365) | - | 239987..240376 (+) | 390 | WP_002935902.1 | hypothetical protein | - |
| NQZ92_RS01370 (NQZ92_01370) | - | 240363..240656 (+) | 294 | WP_002935900.1 | hypothetical protein | - |
| NQZ92_RS01375 (NQZ92_01375) | - | 241031..243016 (+) | 1986 | WP_013730105.1 | DUF1430 domain-containing protein | - |
| NQZ92_RS01380 (NQZ92_01380) | - | 243036..245018 (+) | 1983 | WP_009909197.1 | DUF1430 domain-containing protein | - |
| NQZ92_RS01385 (NQZ92_01385) | - | 245020..245652 (+) | 633 | WP_009909198.1 | ABC transporter ATP-binding protein | - |
| NQZ92_RS01390 (NQZ92_01390) | - | 246075..247409 (+) | 1335 | WP_009909199.1 | sodium:alanine symporter family protein | - |
| NQZ92_RS01395 (NQZ92_01395) | - | 247491..249125 (-) | 1635 | WP_226960622.1 | recombinase family protein | - |
| NQZ92_RS01400 (NQZ92_01400) | - | 249360..250157 (-) | 798 | WP_024409305.1 | replication-relaxation family protein | - |
| NQZ92_RS01405 (NQZ92_01405) | - | 250245..252449 (-) | 2205 | WP_024409306.1 | type IV secretory system conjugative DNA transfer family protein | - |
Sequence
Protein
Download Length: 237 a.a. Molecular weight: 27200.07 Da Isoelectric Point: 6.7422
>NTDB_id=714886 NQZ92_RS01240 WP_012774930.1 222653..223366(+) (treR) [Streptococcus suis strain DNR43]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL
Nucleotide
Download Length: 714 bp
>NTDB_id=714886 NQZ92_RS01240 WP_012774930.1 222653..223366(+) (treR) [Streptococcus suis strain DNR43]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAGCAGCTTCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTAACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCACTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCAATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAATCGAGAAGA
GCGTGAGCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAACAATTCC
AATATACAGAAAGCAAGCATAAAATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAGCAGCTTCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTAACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCACTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCAATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAATCGAGAAGA
GCGTGAGCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAACAATTCC
AATATACAGAAAGCAAGCATAAAATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| treR | Streptococcus mutans UA159 |
52.137 |
98.734 |
0.515 |