Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   NQZ93_RS01195 Genome accession   NZ_CP102141
Coordinates   223016..223729 (+) Length   237 a.a.
NCBI ID   WP_012774930.1    Uniprot ID   A0A142UPI2
Organism   Streptococcus suis strain DNR48     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 218016..228729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ93_RS01185 (NQZ93_01185) treC 219082..220707 (-) 1626 WP_024390719.1 alpha,alpha-phosphotrehalase -
  NQZ93_RS01190 (NQZ93_01190) treP 220788..222782 (-) 1995 WP_024382077.1 PTS system trehalose-specific EIIBC component -
  NQZ93_RS01195 (NQZ93_01195) treR 223016..223729 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  NQZ93_RS01200 (NQZ93_01200) - 223787..224098 (+) 312 WP_002935948.1 hypothetical protein -
  NQZ93_RS01205 (NQZ93_01205) - 224095..224643 (+) 549 WP_002935945.1 CvpA family protein -
  NQZ93_RS01210 (NQZ93_01210) - 224805..227138 (+) 2334 WP_024382076.1 endonuclease MutS2 -
  NQZ93_RS01215 (NQZ93_01215) - 227162..227874 (+) 713 Protein_204 GNAT family N-acetyltransferase -
  NQZ93_RS01220 (NQZ93_01220) trxA 228394..228708 (+) 315 WP_024382075.1 thioredoxin -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27200.07 Da        Isoelectric Point: 6.7422

>NTDB_id=714831 NQZ93_RS01195 WP_012774930.1 223016..223729(+) (treR) [Streptococcus suis strain DNR48]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=714831 NQZ93_RS01195 WP_012774930.1 223016..223729(+) (treR) [Streptococcus suis strain DNR48]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAACAGCTCCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCTTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAACAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCATTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAAG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTTGTGCCAGAGTTGACAACAGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAATCGAGAAGA
GCGTGAGCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAACAATTCC
AATATACAGAAAGCAAGCATAAAATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A142UPI2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.137

98.734

0.515