Detailed information NTG0714778

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PP479_RS00135
• Genome accession: NZ_CP116935
• Coordinates: 33213..34238 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain CUVET18-860
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 28213..39238

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PP479_RS00110 (PP479_00110)	-	28404..28721 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
PP479_RS00115 (PP479_00115)	trkA	28870..30241 (-)	1372	Protein_22	Trk system potassium transporter TrkA	-
PP479_RS00120 (PP479_00120)	rsmB	30268..31572 (-)	1305	WP_034037805.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PP479_RS00125 (PP479_00125)	fmt	31569..32513 (-)	945	WP_009316076.1	methionyl-tRNA formyltransferase	-
PP479_RS00130 (PP479_00130)	def	32568..33074 (-)	507	WP_003107059.1	peptide deformylase	-
PP479_RS00135 (PP479_00135)	tsaP	33213..34238 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PP479_RS00140 (PP479_00140)	dprA	34373..35461 (+)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PP479_RS00145 (PP479_00145)	-	35502..36059 (+)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PP479_RS00150 (PP479_00150)	-	36069..37046 (-)	978	WP_034037807.1	NADPH:quinone reductase	-
PP479_RS00155 (PP479_00155)	hemF	37237..38154 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PP479_RS00160 (PP479_00160)	aroE	38212..39036 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=714778 PP479_RS00135 WP_003097294.1 33213..34238(+) (tsaP) [Pseudomonas aeruginosa strain CUVET18-860]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=714778 PP479_RS00135 WP_003097294.1 33213..34238(+) (tsaP) [Pseudomonas aeruginosa strain CUVET18-860]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATTGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393