Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NQZ95_RS03180 Genome accession   NZ_CP102138
Coordinates   641640..642689 (+) Length   349 a.a.
NCBI ID   WP_012775295.1    Uniprot ID   A0A2K1T047
Organism   Streptococcus suis strain M102942_S11     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 636640..647689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ95_RS03145 (NQZ95_03145) - 636945..638039 (+) 1095 WP_024415248.1 sensor histidine kinase -
  NQZ95_RS03150 (NQZ95_03150) - 638036..638638 (+) 603 WP_024417718.1 response regulator transcription factor -
  NQZ95_RS03155 (NQZ95_03155) - 638946..639164 (+) 219 WP_004194736.1 YqgQ family protein -
  NQZ95_RS03160 (NQZ95_03160) - 639164..639550 (+) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  NQZ95_RS03165 (NQZ95_03165) - 639607..640329 (+) 723 WP_024417717.1 hypothetical protein -
  NQZ95_RS03170 (NQZ95_03170) rsmD 640636..641175 (+) 540 WP_009910569.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NQZ95_RS03175 (NQZ95_03175) coaD 641165..641653 (+) 489 WP_015647233.1 pantetheine-phosphate adenylyltransferase -
  NQZ95_RS03180 (NQZ95_03180) sepM 641640..642689 (+) 1050 WP_012775295.1 SepM family pheromone-processing serine protease Regulator
  NQZ95_RS03185 (NQZ95_03185) - 642877..643518 (+) 642 WP_014638483.1 YutD-like domain-containing protein -
  NQZ95_RS03190 (NQZ95_03190) rlmN 643527..644639 (+) 1113 WP_012028433.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NQZ95_RS03195 (NQZ95_03195) - 644636..645163 (+) 528 WP_002942846.1 VanZ family protein -
  NQZ95_RS03200 (NQZ95_03200) nadE 646256..647080 (-) 825 WP_024413453.1 ammonia-dependent NAD(+) synthetase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37761.83 Da        Isoelectric Point: 4.6112

>NTDB_id=714731 NQZ95_RS03180 WP_012775295.1 641640..642689(+) (sepM) [Streptococcus suis strain M102942_S11]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIARFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALTDDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLEVGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=714731 NQZ95_RS03180 WP_012775295.1 641640..642689(+) (sepM) [Streptococcus suis strain M102942_S11]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAGGAGTATTTCCGTATAGCACGGTTTTACAT
GGAAACTTCGCAAAATATGGCGAAGTATCAAGGATTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTGCTTGCCTTGACGGATGATTCAACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAGGTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGAATAGGCATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGGATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTCATTTCGGCAGCTAAGTCTGGTGCAAGTATCTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAACCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACAAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K1T047

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.807

99.427

0.605