Detailed information NTG0714652

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: NQZ97_RS10585
• Genome accession: NZ_CP102136
• Coordinates: 2180317..2182770 (-)
• Length: 817 a.a.
• NCBI ID: WP_105130824.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M105052_S26
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 2175317..2187770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ97_RS10555 (NQZ97_10555)	hslO	2176448..2177314 (+)	867	WP_043025815.1	Hsp33 family molecular chaperone HslO	-
NQZ97_RS10560 (NQZ97_10560)	dusB	2177307..2178311 (+)	1005	WP_024412855.1	tRNA dihydrouridine synthase DusB	-
NQZ97_RS10565 (NQZ97_10565)	-	2178639..2178881 (-)	243	WP_024388245.1	hypothetical protein	-
NQZ97_RS10570 (NQZ97_10570)	-	2178878..2179111 (-)	234	WP_024388244.1	hypothetical protein	-
NQZ97_RS10575 (NQZ97_10575)	-	2179131..2179514 (-)	384	WP_024416526.1	hypothetical protein	-
NQZ97_RS10580 (NQZ97_10580)	-	2179703..2180203 (-)	501	WP_043025811.1	adenylyltransferase/cytidyltransferase family protein	-
NQZ97_RS10585 (NQZ97_10585)	clpC	2180317..2182770 (-)	2454	WP_105130824.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
NQZ97_RS10590 (NQZ97_10590)	-	2182774..2183232 (-)	459	WP_002937810.1	CtsR family transcriptional regulator	-
NQZ97_RS10595 (NQZ97_10595)	-	2183502..2183840 (+)	339	WP_256787701.1	thioredoxin domain-containing protein	-
NQZ97_RS10600 (NQZ97_10600)	-	2183840..2184541 (+)	702	WP_256787700.1	GNAT family acetyltransferase	-
NQZ97_RS10605 (NQZ97_10605)	tsf	2184697..2185737 (-)	1041	WP_043025357.1	translation elongation factor Ts	-
NQZ97_RS10610 (NQZ97_10610)	rpsB	2186060..2186836 (-)	777	WP_012775356.1	30S ribosomal protein S2	-

Sequence

Protein

• Length: 817 a.a.
• Molecular weight: 90399.01 Da
• Isoelectric Point: 6.5353

>NTDB_id=714652 NQZ97_RS10585 WP_105130824.1 2180317..2182770(-) (clpC) [Streptococcus suis strain M105052_S26]
MKISTGLQRVFEDAQLVAQRYACDYLETWHVLLSFVINHDTVAGAVLAEYPISISDYEHATFVVTDKVYREELDSFRILP
SSKRLDETASFAKKIAEVVKARELGTEHLFMAMLLDKRSTASQILDKVGFCFEDSDDKFRFLDLRKNLEARAGFTKEDLK
AIRSVMKGGKAKPTNMGQMMGMPPAPQSGGLEDYTRDLTALAREGKIEPVIGRDAEIARMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAAGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQTEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGQAAV
ETAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQAEETGLTSIDKALMDKKYKTVSKLLIKTKADAEASQKYDLEV
TEEDVLETLSRLSGIPVAKLSQSDTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSKDHKEVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTETHMQDVVKVMIKPLLAVTAEKGITLKLQPSALKLLAKQGYDPEMGARPLRRLLQTKLEDPLAEMLLRGDLATGST
LKVGVKGEELKFDVVKG

Nucleotide

• Length: 2454 bp

>NTDB_id=714652 NQZ97_RS10585 WP_105130824.1 2180317..2182770(-) (clpC) [Streptococcus suis strain M105052_S26]
ATGAAAATTTCAACTGGTTTACAGCGGGTTTTTGAAGATGCCCAGTTAGTGGCCCAACGCTATGCCTGTGATTACTTGGA
AACCTGGCATGTTCTCTTGTCTTTCGTTATCAACCATGATACAGTCGCTGGCGCTGTTTTGGCAGAATATCCTATTTCAA
TTTCTGACTATGAACATGCAACTTTTGTTGTGACCGACAAGGTCTATCGTGAAGAGTTGGATAGTTTTCGTATTTTACCA
TCTTCTAAACGTTTGGATGAAACAGCTAGTTTTGCCAAGAAAATTGCAGAAGTCGTCAAGGCTAGGGAGCTGGGAACGGA
ACATTTGTTTATGGCTATGTTGTTGGACAAGCGGTCAACAGCTAGTCAGATTTTGGACAAGGTAGGTTTTTGTTTTGAAG
ACTCAGATGATAAGTTTCGTTTCTTGGATTTGCGTAAAAACTTGGAGGCACGTGCGGGATTTACCAAAGAGGACCTTAAA
GCTATCCGCAGTGTGATGAAGGGTGGCAAAGCCAAACCTACCAATATGGGACAGATGATGGGAATGCCTCCAGCACCTCA
AAGTGGTGGATTAGAAGACTACACTCGTGATTTGACAGCTTTGGCGCGTGAAGGGAAGATTGAACCTGTCATCGGTCGAG
ACGCTGAGATTGCACGGATGATCCAAATTCTATCACGTAAAACCAAGAATAACCCAGTTCTAGTTGGTGATGCTGGTGTC
GGAAAAACTGCGCTTGCTTTGGGTCTTGCTCAACGTGTTGCTGCAGGTGATGTCCCTGTCAGCTTGGCTAAGATGCGGGT
TTTGGAACTTGACTTGATGAATGTTATCGCTGGAACTCGTTTCCGTGGTGATTTCGAAGAGCGGATGAATAATATCATCA
ACGACATCGAGGAAGATGGTCAAGTCATCCTTTTCATCGATGAGTTGCATACCATTATGGGGTCTGGCTCGGGGATTGAT
TCGACCTTGGATGCAGCCAATATCCTCAAACCAGCTCTTGCTCGTGGCACCCTCCGTACGGTCGGAGCGACGACTCAGAC
AGAGTACCAAAAGCATATTGAGAAAGACGCAGCCTTGGTTCGCCGTTTTGCCAAAGTGACCATTGAAGAGCCGACAGTTG
AGGACAGTATTGCCATTTTGACAGGGCTTAAAGGTACTTTTGAGAAATACCACAGGGTCCGTATTGGACAAGCAGCTGTA
GAGACTGCTGTGACCTACGCTAAGCGGTATTTGACAAGTAAAAACCTGCCAGATTCAGCCATTGATTTGCTGGATGAAGC
CAGTGCAACAGTACAAAATCGTGTGAAAGGTCAGGCAGAGGAAACAGGACTGACAAGCATAGACAAGGCCTTGATGGATA
AAAAATATAAGACTGTCAGCAAGCTTTTGATTAAAACGAAAGCAGATGCCGAGGCTAGTCAAAAATATGACCTTGAAGTA
ACAGAAGAAGATGTTTTAGAAACACTTAGCCGCTTGTCAGGTATCCCAGTAGCCAAGCTTAGCCAATCAGATACTAAGAA
GTATCTGAATCTGGAAGCAGAATTGCACAAGCGTGTGATTGGGCAGGAAGAAGCTATTTCTGCAGTTAGCAGAGCTATTC
GTCGTAATCAGTCAGGGATTCGTACAGGTCGCAGACCGATTGGTTCCTTTATGTTCTTGGGACCAACTGGTGTCGGTAAG
ACAGAGCTTGCTAAAGCCTTGGCAGAGGTTCTCTTTGATGATGAATCCGCTCTTATCCGTTTTGATATGTCTGAGTATAT
GGAGAAATTTGCGGCCAGCCGTCTCAATGGAGCGCCTCCAGGCTACGTGGGCTATGAAGAAGGTGGCGAATTGACGGAAA
AAGTTCGTAACAAACCTTATTCTGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCATCCAGATATTTTTAACGTGCTTTTG
CAGGTCTTGGATGATGGTGTTCTGACGGACAGTAAGGGACGTAAGGTTGATTTCTCAAATACCATTATTATCATGACGTC
AAACCTTGGAGCAACAGCCCTTCGGGATGATAAGACAGTTGGTTTTGGTGCCCTTGATTTATCTAAGGACCACAAGGAAG
TGGAGAAACGCATTTTTGAGGAATTGAAAAAAGCCTATCGTCCAGAATTTATCAACCGTATTGACGAGAAAGTTGTCTTC
CATAGCCTAACGGAAACTCATATGCAGGATGTTGTCAAGGTCATGATTAAACCTTTGTTGGCTGTAACAGCTGAGAAAGG
AATTACTCTTAAACTGCAACCGTCAGCCCTTAAGTTATTGGCAAAACAAGGTTATGACCCTGAAATGGGAGCTCGTCCAC
TTCGTAGACTCTTGCAGACCAAATTGGAAGATCCATTAGCAGAGATGTTGCTCCGTGGTGACTTGGCTACTGGTTCGACC
TTGAAGGTTGGGGTCAAGGGTGAAGAGCTCAAGTTTGATGTGGTAAAGGGATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (233-365)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (723-803)

• AAA lid domain (AAA_lid_9) (372-455)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (102-129)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-56)

• AAA domain (Cdc48 subfamily) (AAA_2) (545-716)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae Rx1	71.902	99.755	0.717
clpC	Streptococcus pneumoniae D39	71.902	99.755	0.717
clpC	Streptococcus pneumoniae TIGR4	71.902	99.755	0.717
clpC	Streptococcus mutans UA159	66.708	99.633	0.665
clpC	Streptococcus thermophilus LMG 18311	64.501	100	0.656
clpC	Streptococcus thermophilus LMD-9	64.38	100	0.655
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.102	100	0.502
clpC	Bacillus subtilis subsp. subtilis str. 168	43.473	100	0.444