Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NQZ97_RS03965 Genome accession   NZ_CP102136
Coordinates   785730..786533 (+) Length   267 a.a.
NCBI ID   WP_004298858.1    Uniprot ID   A0A0Z8N7Q9
Organism   Streptococcus suis strain M105052_S26     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 780730..791533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS03940 (NQZ97_03940) - 781159..781857 (-) 699 WP_004298848.1 amino acid ABC transporter permease -
  NQZ97_RS03945 (NQZ97_03945) - 781872..782711 (-) 840 WP_170238280.1 transporter substrate-binding domain-containing protein -
  NQZ97_RS03950 (NQZ97_03950) - 782722..783483 (-) 762 WP_170238279.1 amino acid ABC transporter ATP-binding protein -
  NQZ97_RS03955 (NQZ97_03955) micA 783677..784381 (+) 705 WP_004298854.1 response regulator YycF Regulator
  NQZ97_RS03960 (NQZ97_03960) micB 784374..785723 (+) 1350 WP_170238278.1 cell wall metabolism sensor histidine kinase VicK Regulator
  NQZ97_RS03965 (NQZ97_03965) vicX 785730..786533 (+) 804 WP_004298858.1 MBL fold metallo-hydrolase Regulator
  NQZ97_RS03970 (NQZ97_03970) vga(F) 787061..788446 (+) 1386 WP_257110684.1 ABC-F type ribosomal protection protein Vga(F) -
  NQZ97_RS03975 (NQZ97_03975) pbp2b 788538..790610 (+) 2073 WP_257110685.1 penicillin-binding protein PBP2B -
  NQZ97_RS03980 (NQZ97_03980) recR 790619..791215 (+) 597 WP_024386938.1 recombination mediator RecR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29543.64 Da        Isoelectric Point: 5.9824

>NTDB_id=714631 NQZ97_RS03965 WP_004298858.1 785730..786533(+) (vicX) [Streptococcus suis strain M105052_S26]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIV
ANADAYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=714631 NQZ97_RS03965 WP_004298858.1 785730..786533(+) (vicX) [Streptococcus suis strain M105052_S26]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTACCTAGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGCATGGAC
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGATATTGAGTCCTTTGGTGTCAGTCATGATGCGGCTTGTCCTCAATTTT
ATCGTTTTATGAAGGATGATAAGTCCTTTGTCATGTTAACGGATACTGGCTATGTCAGTGATCGAATGGCTGGGATTGTG
GCGAATGCAGATGCCTATTTGATTGAGTCTAATCATGATGTTGAAATCTTGCGTGCGGGTTCTTATTCTTGGAACCTCAA
GCAACGGATTTTGTCTGATAAGGGGCACCTTTGTAATGAGGATGGTGCTGATGCCATGATTCGATCACTAGGAAATCGGA
CTAAAAAGATTTACCTAGGGCATTTATCAAAGGAAAACAATATCAAGGAATTGGCCCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8N7Q9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.404

100

0.764