Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NQZ97_RS02905 Genome accession   NZ_CP102136
Coordinates   598300..599349 (+) Length   349 a.a.
NCBI ID   WP_043026533.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 593300..604349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS02870 (NQZ97_02870) - 593814..594908 (+) 1095 WP_172097000.1 sensor histidine kinase -
  NQZ97_RS02875 (NQZ97_02875) - 594905..595507 (+) 603 WP_043033350.1 response regulator transcription factor -
  NQZ97_RS02880 (NQZ97_02880) - 595612..595830 (+) 219 WP_043026539.1 YqgQ family protein -
  NQZ97_RS02885 (NQZ97_02885) - 595830..596216 (+) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  NQZ97_RS02890 (NQZ97_02890) - 596273..596995 (+) 723 WP_043026537.1 serine protease -
  NQZ97_RS02895 (NQZ97_02895) rsmD 597296..597835 (+) 540 WP_043026535.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NQZ97_RS02900 (NQZ97_02900) coaD 597825..598313 (+) 489 WP_002939048.1 pantetheine-phosphate adenylyltransferase -
  NQZ97_RS02905 (NQZ97_02905) sepM 598300..599349 (+) 1050 WP_043026533.1 SepM family pheromone-processing serine protease Regulator
  NQZ97_RS02910 (NQZ97_02910) - 599537..600178 (+) 642 WP_043026531.1 YutD-like domain-containing protein -
  NQZ97_RS02915 (NQZ97_02915) rlmN 600187..601299 (+) 1113 WP_012028433.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NQZ97_RS02920 (NQZ97_02920) - 601296..601817 (+) 522 WP_043026528.1 VanZ family protein -
  NQZ97_RS02925 (NQZ97_02925) trpB 602444..603619 (+) 1176 WP_043026526.1 tryptophan synthase subunit beta -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37732.74 Da        Isoelectric Point: 4.4632

>NTDB_id=714624 NQZ97_RS02905 WP_043026533.1 598300..599349(+) (sepM) [Streptococcus suis strain M105052_S26]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTIRSSEEMTGGADNEEYFRIAQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKENPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=714624 NQZ97_RS02905 WP_043026533.1 598300..599349(+) (sepM) [Streptococcus suis strain M105052_S26]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAATTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAAGAGTATTTCCGTATAGCACAGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTACCAAGGTTTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTACTTGCCTTGGCGGATGATTCGACCTTTAAAAAAGTTCTTAATATTGCTGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAACTTGGAAGTGATGTGACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGGATAGGTATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATCTTTTTCG
TACCAAATAATCCAGTTGATGTGGAAGTTTTGAAGGAAAATCCAAAGGCTAAAACCAACTATGAGGAAGCTAAAGAAGCT
GCGGAGAAAGCAGGATTGGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACGAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

61.383

99.427

0.61