Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   NQZ97_RS02810 Genome accession   NZ_CP102136
Coordinates   581684..583459 (+) Length   591 a.a.
NCBI ID   WP_043027022.1    Uniprot ID   -
Organism   Streptococcus suis strain M105052_S26     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 576684..588459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ97_RS02775 (NQZ97_02775) - 577119..577646 (+) 528 WP_172020315.1 metallophosphoesterase -
  NQZ97_RS02780 (NQZ97_02780) cbpB 577643..578101 (+) 459 WP_012027618.1 cyclic-di-AMP-binding protein CbpB -
  NQZ97_RS02785 (NQZ97_02785) xerD 578098..578829 (+) 732 WP_172020316.1 site-specific tyrosine recombinase XerD -
  NQZ97_RS02790 (NQZ97_02790) - 578829..579548 (+) 720 WP_002942755.1 segregation/condensation protein A -
  NQZ97_RS02795 (NQZ97_02795) scpB 579532..580101 (+) 570 WP_024402647.1 SMC-Scp complex subunit ScpB -
  NQZ97_RS02800 (NQZ97_02800) - 580091..580822 (+) 732 WP_024375836.1 pseudouridine synthase -
  NQZ97_RS02805 (NQZ97_02805) yidD 580822..581061 (+) 240 WP_043027021.1 membrane protein insertion efficiency factor YidD -
  NQZ97_RS02810 (NQZ97_02810) oppA 581684..583459 (+) 1776 WP_043027022.1 oligopeptide ABC transporter substrate-binding protein Regulator
  NQZ97_RS02815 (NQZ97_02815) - 583846..584391 (+) 546 WP_105147097.1 tRNA (cytidine(34)-2'-O)-methyltransferase -
  NQZ97_RS02820 (NQZ97_02820) - 584836..585393 (+) 558 WP_024417723.1 ECF transporter S component -
  NQZ97_RS02825 (NQZ97_02825) - 585418..586071 (+) 654 WP_043027025.1 phosphatase PAP2 family protein -
  NQZ97_RS02830 (NQZ97_02830) - 586244..587365 (+) 1122 WP_257110567.1 IS110 family transposase -

Sequence

Protein


Download         Length: 591 a.a.        Molecular weight: 65481.20 Da        Isoelectric Point: 4.2948

>NTDB_id=714623 NQZ97_RS02810 WP_043027022.1 581684..583459(+) (oppA) [Streptococcus suis strain M105052_S26]
MKRMKNIALTGIGLLSIATLTACQTKERTSDVALTFKSEVTHEGQTIEGGSLKYALVASAPSTGILIDELSQTAVDSTFA
GMVDISMFGYDSARTLDDSGLAKAEFDVDAKTVTVSLTGKDYKWSDGQAFTIDDYIFTIEQLASPDYTGVRADTTYTNII
GFEEFQAGTASEISGVRKVDDYTVVLSVKDMSPSMMYAGGGVPYLVMPKHIFKDIAVKDWESSEYSRTAKVVGMGPYKVK
EIVNGESVTYVPNEYYFKGKVKLDSYRIDIVSPDTIVAEMRAGNYDIADMPTDQYESYKDLSNITLLGSLDGIYNYIGFN
LGKYDDASGKNVTNPNAKMNNVKLRQAMGYALDNAVIGEKLYNGLYHPTNSLIISFFGDVHDSELAGYSYNPEKAKKLLD
EAGYKDVDGDGMREDADGKSLTISVAAQKSTETQETMVQQYLTWWKEIGLNVELYTGRTIEYNTFYESIAANDEGIDVYL
AAWIAGLDPDPTSLWGPEAMYNYTRFVSDENTALLNKITSAESFDEQKNIENYKAWQEYAFEQAFAIPTFERESITAVNK
RVKYYDVYIGSDSKLSHENLELTAEKGIAAE

Nucleotide


Download         Length: 1776 bp        

>NTDB_id=714623 NQZ97_RS02810 WP_043027022.1 581684..583459(+) (oppA) [Streptococcus suis strain M105052_S26]
ATGAAAAGAATGAAAAACATCGCTTTAACTGGTATCGGTCTGCTTTCTATTGCAACGTTAACAGCTTGCCAAACTAAAGA
AAGGACGAGTGATGTTGCTCTGACATTTAAATCAGAAGTGACACACGAAGGACAAACTATTGAAGGCGGAAGTCTCAAAT
ATGCCTTGGTAGCTTCGGCGCCTTCGACCGGTATCTTAATTGATGAATTATCGCAGACGGCGGTAGACTCAACCTTTGCA
GGCATGGTTGATATTTCTATGTTTGGATATGATTCAGCTCGGACGTTAGACGATTCAGGCCTTGCTAAGGCAGAGTTTGA
TGTAGACGCAAAGACAGTTACCGTTAGTTTGACAGGCAAGGACTATAAGTGGTCCGATGGGCAAGCCTTCACCATCGATG
ATTATATTTTCACAATCGAACAACTAGCTAGTCCAGACTATACAGGGGTTCGTGCAGATACTACCTATACAAATATCATT
GGCTTTGAAGAATTTCAGGCTGGAACAGCAAGTGAAATTTCAGGTGTTAGGAAGGTTGATGATTATACGGTAGTCCTCTC
AGTGAAAGACATGTCTCCATCCATGATGTATGCTGGTGGTGGAGTACCTTATTTAGTCATGCCGAAACACATTTTTAAAG
ACATTGCAGTCAAAGATTGGGAATCAAGTGAGTATTCTCGTACGGCAAAAGTTGTCGGTATGGGCCCTTATAAGGTCAAG
GAAATTGTCAATGGCGAGTCGGTGACCTATGTACCAAATGAGTACTATTTTAAAGGGAAAGTTAAGCTAGATAGTTACAG
GATTGATATTGTTTCACCAGATACGATTGTTGCAGAAATGAGAGCAGGCAATTATGATATTGCTGATATGCCAACAGATC
AGTACGAATCTTACAAGGACTTATCTAATATTACTTTACTAGGTAGTCTGGATGGTATTTACAATTATATTGGCTTCAAT
CTTGGTAAGTACGATGATGCTAGTGGTAAGAATGTGACCAATCCTAATGCTAAGATGAATAATGTTAAATTGCGTCAAGC
AATGGGATATGCGTTGGACAATGCGGTGATTGGAGAGAAATTATATAATGGATTGTATCACCCGACAAACTCACTAATTA
TCTCTTTCTTTGGAGATGTTCACGATTCAGAACTAGCTGGCTATAGCTATAATCCTGAAAAGGCTAAAAAACTTCTCGAT
GAGGCAGGATATAAAGACGTAGATGGAGACGGTATGCGTGAAGATGCTGATGGAAAATCGCTTACTATCAGTGTTGCAGC
ACAGAAATCAACCGAAACGCAAGAAACCATGGTACAGCAATACCTTACATGGTGGAAAGAAATTGGTTTGAATGTGGAAC
TCTATACAGGAAGAACTATTGAGTACAATACTTTCTATGAATCAATTGCTGCCAATGATGAGGGGATTGATGTCTATCTT
GCTGCTTGGATTGCCGGCCTAGATCCAGACCCGACATCATTGTGGGGACCTGAAGCGATGTACAACTATACTCGCTTCGT
TTCAGATGAAAACACAGCACTTTTAAATAAAATTACCTCTGCTGAGTCATTTGACGAACAGAAAAATATTGAAAACTACA
AAGCTTGGCAAGAATATGCATTCGAGCAAGCCTTTGCAATTCCAACCTTTGAACGTGAAAGTATTACTGCCGTTAACAAG
CGCGTTAAATATTACGACGTTTATATCGGTTCGGACAGTAAATTAAGCCATGAAAATCTTGAGTTGACTGCGGAAAAAGG
GATTGCAGCAGAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(100-495)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

65.657

100

0.66