Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   NQU59_RS01470 Genome accession   NZ_CP102099
Coordinates   300628..302853 (+) Length   741 a.a.
NCBI ID   WP_373462994.1    Uniprot ID   -
Organism   Acinetobacter colistiniresistens strain C-214     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 295628..307853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS01445 (NQU59_01445) lnt 295957..297516 (+) 1560 WP_257064669.1 apolipoprotein N-acyltransferase -
  NQU59_RS01450 (NQU59_01450) - 297518..297856 (-) 339 WP_005240007.1 tRNA-binding protein -
  NQU59_RS01455 (NQU59_01455) - 298062..298406 (-) 345 WP_096910976.1 hypothetical protein -
  NQU59_RS01460 (NQU59_01460) gspG 298668..299210 (-) 543 WP_096910975.1 type II secretion system major pseudopilin GspG -
  NQU59_RS01465 (NQU59_01465) gspF 299210..300415 (-) 1206 WP_144583135.1 type II secretion system inner membrane protein GspF -
  NQU59_RS01470 (NQU59_01470) priA 300628..302853 (+) 2226 WP_373462994.1 primosomal protein N' Machinery gene
  NQU59_RS01475 (NQU59_01475) - 302974..304800 (+) 1827 WP_257064677.1 cation:proton antiporter -
  NQU59_RS01480 (NQU59_01480) hslO 304918..305793 (+) 876 WP_257064678.1 Hsp33 family molecular chaperone HslO -
  NQU59_RS01485 (NQU59_01485) - 305909..306520 (+) 612 WP_257064681.1 LysE family translocator -
  NQU59_RS01490 (NQU59_01490) - 306662..307606 (+) 945 WP_257064682.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84143.89 Da        Isoelectric Point: 8.4547

>NTDB_id=714376 NQU59_RS01470 WP_373462994.1 300628..302853(+) (priA) [Acinetobacter colistiniresistens strain C-214]
MPIQNSNAILYRIRVAIPVYLYDTFDYTVSAEQYAQAQVGARVAISFGRQNLVGIITEKVDPNQAFTGQFKLKAITELLD
EEAILDQQVLTLLTWSAQYYQFPIGEVMQSALPTLLRQGRALDILFHLWKITPHDDPNTLLKRSQKQYDAYQVLKLHPHG
TTENVLNLSGVESSTLKALEKKGLVECCLEPHDFTPTPVQLAQVPLTANEDQKKAIQQILKAQHHYQAFLLDGLTGSGKT
EVYLQVMYEVLKQGKQVLVLVPEIGLTPQTVARFKSRFHCDVALLHSGLNDSKRLQAWQHAQTGKASIIIGTRSAIYTPL
PHLGLIILDEEHDLSYKQQEGFRYHTRDVALYRGHLQNCPVILGSATPSIDSYHLVESGKLQVLELNQRAGVAVLPKIYV
VDLKIAKKQHGLSQTLIEQIKHTLERKEQVLIFLNRRGYAPILMCESCGWQANCPHCDAHFTLHSQPYHYLHCHHCGTIN
RLPDHCPACQKQSLKTIGAGTAKLEEHLQELFPHNDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPH
VTLVAILDIDAGLLSVDPRAPERTAQLIVQVAGRAGRGEHKGSVYLQSLRPDHPMLTTLIEHDYRTVAKQMLTDRKIAML
PPYRYAVLVRVESKDRDYSQQFLADIAQQLREMTGDLVDIWGPIPAPMERKAGRYRAHMVILSADRAKLHFYLRQWWQQV
VHLPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=714376 NQU59_RS01470 WP_373462994.1 300628..302853(+) (priA) [Acinetobacter colistiniresistens strain C-214]
ATGCCGATCCAGAATTCTAACGCAATCCTTTACCGTATCCGAGTTGCCATACCTGTCTACCTGTATGACACCTTTGACTA
TACGGTCAGTGCAGAGCAATATGCTCAAGCACAGGTGGGAGCACGCGTTGCCATTTCTTTTGGACGGCAAAACCTCGTGG
GAATTATTACCGAAAAGGTTGATCCAAACCAAGCGTTTACAGGGCAGTTCAAACTTAAAGCCATTACCGAACTTCTCGAT
GAAGAAGCTATTTTAGACCAGCAAGTTTTAACTTTGTTGACATGGTCAGCCCAATATTATCAATTTCCGATTGGGGAGGT
GATGCAAAGTGCCTTACCGACCTTATTGAGACAGGGCCGTGCCTTAGATATCCTGTTTCATTTATGGAAGATCACTCCTC
ATGATGATCCCAATACCTTATTAAAGCGTTCTCAAAAACAATATGATGCTTATCAGGTTTTAAAACTACATCCGCATGGC
ACCACTGAAAATGTACTCAATCTCAGTGGCGTCGAAAGCTCAACCCTAAAAGCCTTAGAAAAAAAGGGACTGGTTGAATG
TTGTCTGGAACCGCATGATTTCACGCCGACCCCTGTGCAACTGGCACAAGTCCCCTTAACTGCGAACGAAGATCAGAAGA
AAGCGATTCAACAGATCCTCAAAGCACAGCATCATTATCAGGCCTTCTTACTGGATGGCTTGACGGGTAGTGGTAAAACC
GAAGTTTATTTGCAAGTTATGTATGAGGTACTTAAACAAGGCAAACAGGTTCTGGTTCTGGTGCCTGAAATTGGCCTCAC
CCCGCAAACGGTCGCGCGTTTTAAATCACGTTTTCATTGTGATGTAGCCTTACTACATTCGGGCTTAAATGATTCAAAAC
GTTTACAGGCATGGCAACATGCACAAACGGGCAAAGCCTCAATTATCATTGGCACTCGTTCTGCGATTTATACCCCACTG
CCACATCTAGGCTTAATCATTCTGGATGAAGAGCATGATCTATCCTATAAGCAGCAAGAAGGTTTCCGTTACCATACCCG
TGATGTGGCCTTATATCGTGGGCATTTGCAAAACTGTCCCGTGATCCTTGGTTCTGCCACCCCCAGTATCGATAGTTATC
ATTTAGTGGAGTCAGGCAAGTTACAGGTACTCGAACTGAATCAGCGTGCTGGTGTCGCGGTACTGCCCAAGATATATGTG
GTCGACTTAAAAATTGCCAAAAAGCAGCATGGTCTGAGCCAGACTTTAATTGAACAGATCAAGCACACTCTAGAACGTAA
AGAACAGGTACTGATCTTTTTAAATCGACGTGGTTATGCCCCCATCCTGATGTGTGAAAGCTGTGGCTGGCAAGCCAATT
GCCCGCATTGTGATGCGCATTTTACCTTACATTCGCAGCCCTACCATTATTTGCATTGTCATCATTGCGGCACCATCAAT
CGTCTTCCCGACCATTGCCCTGCATGCCAGAAACAAAGTCTAAAAACCATCGGTGCAGGAACAGCAAAACTTGAAGAACA
CTTACAAGAATTATTTCCTCACAATGACGTGATTCGTGTTGATCGTGACAGTACCAGCCGAGTCGGCAGCTGGCAGAAGA
TTTATGATCGCATTCAGCAAAATAAGCCGAGCATTTTGTTGGGCACGCAAATGCTGGCCAAAGGTCACCATTTCCCACAT
GTGACGCTTGTTGCGATTCTGGATATAGATGCAGGCCTGCTCAGTGTCGACCCGCGTGCACCTGAACGGACTGCACAGCT
GATTGTGCAGGTGGCAGGGCGCGCTGGACGTGGCGAGCATAAAGGCAGTGTCTATTTACAGAGTCTACGTCCTGATCATC
CGATGTTGACCACCTTAATCGAGCATGACTACCGTACTGTGGCCAAACAAATGCTGACGGATCGTAAAATCGCCATGCTC
CCCCCTTATCGCTATGCAGTTCTGGTTCGGGTCGAATCTAAAGATCGTGACTATAGCCAGCAGTTCCTTGCTGATATAGC
CCAACAGTTAAGGGAAATGACAGGCGATTTGGTTGATATCTGGGGGCCAATCCCTGCCCCGATGGAACGCAAAGCAGGAC
GTTATCGCGCGCATATGGTGATTTTGTCTGCTGATCGAGCAAAGCTGCACTTTTATTTACGGCAATGGTGGCAACAAGTG
GTACATTTACCTCGTCAGCACCAACTGAGACTTTCGATTGATGTTGATCCCCAAGAGTTTAGCTAA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(14-113)

Primosomal protein N C-terminal domain (PriA_C)

(642-737)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

82.721

99.19

0.821