Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   NQU59_RS00910 Genome accession   NZ_CP102099
Coordinates   194956..195843 (-) Length   295 a.a.
NCBI ID   WP_005239830.1    Uniprot ID   N9PHG1
Organism   Acinetobacter colistiniresistens strain C-214     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 189956..200843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQU59_RS00890 (NQU59_00890) miaB 191179..192630 (+) 1452 WP_005239826.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  NQU59_RS00895 (NQU59_00895) - 192670..193743 (+) 1074 WP_005239827.1 PhoH family protein -
  NQU59_RS00900 (NQU59_00900) ybeY 194041..194526 (+) 486 WP_005239828.1 rRNA maturation RNase YbeY -
  NQU59_RS00905 (NQU59_00905) - 194538..194837 (+) 300 WP_005239829.1 antibiotic biosynthesis monooxygenase -
  NQU59_RS00910 (NQU59_00910) tonB2 194956..195843 (-) 888 WP_005239830.1 energy transducer TonB Machinery gene
  NQU59_RS00915 (NQU59_00915) - 196087..196767 (+) 681 WP_096911394.1 hypothetical protein -
  NQU59_RS00920 (NQU59_00920) - 196965..197669 (+) 705 WP_005239834.1 DUF3108 domain-containing protein -
  NQU59_RS00925 (NQU59_00925) - 197758..198333 (+) 576 WP_005239835.1 xanthine phosphoribosyltransferase -
  NQU59_RS00930 (NQU59_00930) - 198383..199207 (-) 825 WP_257064581.1 YwqG family protein -
  NQU59_RS00935 (NQU59_00935) thyA 199379..200221 (+) 843 WP_005239837.1 thymidylate synthase -
  NQU59_RS00940 (NQU59_00940) - 200248..200757 (+) 510 WP_005239838.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33528.20 Da        Isoelectric Point: 7.0808

>NTDB_id=714375 NQU59_RS00910 WP_005239830.1 194956..195843(-) (tonB2) [Acinetobacter colistiniresistens strain C-214]
MWNKINFRSELSPSWWQDPIFIGAVLLAMLMHAAVLAIQFTMPSPSDTSTKEIAVTVRPSQEKVKEADFLAQADQHGSGD
FREAHRMSSDMPTPMQADATAGEKELESLEKIQQKRELKFEEKVLMTVLSWQKQAEQSERKKTLDDLQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDEAKQQHLAGEVRLMVILNAEGGIRAIRL
IESSGHAILDEAAKASVRRGAPFGPFDAAMKKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=714375 NQU59_RS00910 WP_005239830.1 194956..195843(-) (tonB2) [Acinetobacter colistiniresistens strain C-214]
ATGTGGAATAAAATAAATTTTCGTTCAGAATTGTCTCCTTCTTGGTGGCAAGATCCCATTTTTATTGGGGCGGTGCTGTT
AGCGATGCTAATGCATGCTGCTGTGCTTGCCATCCAATTTACCATGCCATCGCCATCTGATACATCAACCAAAGAAATTG
CAGTAACCGTTCGTCCGAGCCAAGAAAAAGTCAAAGAGGCTGATTTTTTAGCACAAGCCGATCAACACGGTTCTGGTGAC
TTTCGCGAAGCGCATCGGATGTCGAGTGATATGCCTACGCCGATGCAAGCCGATGCGACTGCGGGTGAGAAAGAGTTAGA
AAGTCTGGAAAAAATTCAGCAAAAACGAGAATTAAAATTTGAAGAAAAAGTGTTGATGACGGTTTTAAGCTGGCAAAAAC
AAGCAGAACAGAGTGAACGTAAAAAGACCTTGGATGATTTACAAAGTCAGTTTCAAGCTAAAGCGGCCATGGTCGCGAGC
TTGGAAGCTCAATATTTACAACGCCAACAGAATTTTAGCCGTAAACAGCGCATTAAAACCGTCGATGGCATTCAAGCCAA
GCAAGATGCATCCGCCGCTTATCTGGATAAATTCCGTCAAAAAGTCGAACTTTATGGCAACCGTTACTATCCAGATGAGG
CGAAACAGCAGCACTTGGCAGGTGAGGTTCGTTTGATGGTGATTCTCAATGCTGAAGGGGGTATTCGGGCCATTCGTTTA
ATTGAAAGCTCGGGTCATGCAATTTTAGATGAGGCGGCAAAGGCTTCTGTGCGTCGTGGTGCACCCTTTGGTCCATTTGA
TGCGGCCATGAAAAAAGATATTTCTGAGTTGAGGATTATTCGGACCTGGCGTTTTGATCCTGTGGATGCTGAGTTTGAAG
TGCATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9PHG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

78.648

95.254

0.749