Detailed information NTG0714355

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: NP165_RS10740
• Genome accession: NZ_CP102096
• Coordinates: 2286236..2289622 (+)
• Length: 1128 a.a.
• NCBI ID: WP_257083957.1
• Uniprot ID: -
• Organism: Vibrio japonicus strain JCM 31412
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2281236..2294622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP165_RS10720 (NP165_10720)	erpA	2281667..2282008 (-)	342	WP_257083953.1	iron-sulfur cluster insertion protein ErpA	-
NP165_RS10725 (NP165_10725)	hemL	2282265..2283557 (+)	1293	WP_257083954.1	glutamate-1-semialdehyde 2,1-aminomutase	-
NP165_RS10730 (NP165_10730)	-	2283828..2284913 (+)	1086	WP_257083955.1	AI-2E family transporter	-
NP165_RS10735 (NP165_10735)	rsmC	2284984..2286006 (+)	1023	WP_257083956.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
NP165_RS10740 (NP165_10740)	chiS	2286236..2289622 (+)	3387	WP_257083957.1	response regulator	Regulator
NP165_RS10745 (NP165_10745)	-	2290370..2292052 (+)	1683	WP_257083958.1	ABC transporter substrate-binding protein	-
NP165_RS10750 (NP165_10750)	-	2292221..2293207 (+)	987	WP_257083959.1	ABC transporter permease	-
NP165_RS10755 (NP165_10755)	-	2293210..2294238 (+)	1029	WP_257083960.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127309.83 Da
• Isoelectric Point: 6.0659

>NTDB_id=714355 NP165_RS10740 WP_257083957.1 2286236..2289622(+) (chiS) [Vibrio japonicus strain JCM 31412]
MFKLYRKQRFKRLQNTLMLAFLVLSITPLTITAIFFLQSHTTDLQEQSTSHLISVRDSKQQQITDYLNAKESEVMGFVRS
ELAYASGGRFYGLVNAFRSLGLNMDEAREYAQKRYIQGSGDQIKTSVLPQSSIYNGTERYRLLHKRYHWAYLELLKRSDF
DDILLVDREGNVTYSIYKNGDYGTNLLNGQYTDENLGRTFKKLRDLVSEKRKTNEDFTPVVMSDFHLEQGKSVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLISDTHNVASTKTLLVGSDYHPITLAYQKEDIERSKEVVDLALSGLTDFGNYTNSDKEE
IIAAYSLVSVKGIDWALVVEMPEKLAFARVHQLEKIFVVAMFVAIVLVIMASHYLSNFVTAPLLKLTWAAEKVSAGDLDA
AMNNTDRKDEIGRLAVSFERMQRSIRDKMQLIKQQNEELEKNLKLIKKQNDDLQLANKLKDEFLATTSHELRTPLHGMIG
IAEALVSGANGPITSDHKYQLDIIINSGQRLATLVDDLLDYHKMRYGNLDIETSAVDLSSSTRLVLELSAHLVGSKPLRI
INQISDQSVWVSADPQRVEQVLYNLIGNAIKYTSEGKIVISATEVDNHIRVQVVDTGQGIPADQLDHIFEPLIQAGSDAN
RYRQGAGLGLSISRQLIELMKGSLYVSSQPMVGTTFSFTLPIASDEQVQNACVREMPHFQAPDNSAIETTDTTNLPENPN
GPLLLVVDDEPVNLRILNSFLRLEGYRVHAAVDAREALESIAEQKPELVLLDIMMPGTSGYEVCETLRQTYDHAQLPIIM
LTALNQANDRIRGFEAGANDYLSKPFNKQELSARIKAHLTASQAELRRIENQELHLELKQRALIESRLLETQGRLLEQLE
ASPEAIICVREDNKIKFANEAASKLFKRTKEQLKRSAADELIAPKFLHVTQEHYCGAIDVYVEDVRQSLSADVLKLPEGS
DFNSMYIFNVGGTINAGRIKNLEAAVDALSSYAFNGDKDKLQELKELGGEFTRLADKVSSDSKSKQDIMRDILVDAMTSA
LDYWESVTGQSKFAFAEQSGLWRVYLDRSTLQTRTLDKYLRVETLPKSPRWRTVLNSLEYILEHCNEQSPERAHIETLRN
KLQHLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=714355 NP165_RS10740 WP_257083957.1 2286236..2289622(+) (chiS) [Vibrio japonicus strain JCM 31412]
ATGTTTAAGTTGTATCGAAAGCAAAGATTTAAACGCCTCCAGAACACGCTAATGTTGGCATTTCTCGTCTTGAGTATCAC
GCCATTGACGATTACGGCGATCTTTTTTCTTCAGTCTCACACCACTGACCTACAGGAACAGAGTACTTCGCACTTGATTT
CGGTAAGAGATAGTAAACAGCAACAGATTACCGACTACCTAAATGCGAAAGAATCAGAAGTCATGGGCTTTGTTCGCTCT
GAACTGGCTTATGCAAGTGGTGGGCGTTTCTATGGATTAGTCAATGCATTTAGGAGCTTAGGGCTGAATATGGATGAAGC
CCGAGAGTATGCGCAAAAGCGATACATTCAGGGTTCTGGCGATCAAATAAAAACGTCCGTTCTTCCTCAATCAAGCATTT
ATAACGGTACAGAGCGCTATCGGCTGTTGCACAAGCGCTACCACTGGGCCTATCTTGAGCTACTCAAACGTTCGGATTTT
GACGATATCTTATTAGTCGACCGCGAAGGTAATGTAACCTATTCCATCTATAAAAACGGTGATTATGGAACGAACCTGCT
TAATGGTCAGTACACTGATGAAAACTTAGGTAGAACCTTTAAGAAGCTGCGCGATTTAGTATCTGAGAAAAGAAAAACCA
ACGAAGATTTCACGCCAGTTGTCATGTCAGATTTCCATCTTGAGCAAGGTAAGTCTGTTGCGTGGCTAGGTGCACCAATC
ATTCAACAAGGTTATTTACACAGCTACGCCATGTTCCGCCTACCTAACAATGGCATTACTAAACTTATATCAGACACCCA
TAATGTAGCTTCTACAAAAACATTGCTTGTCGGCAGTGACTATCACCCAATAACTCTCGCCTATCAGAAAGAAGATATTG
AACGCAGCAAAGAAGTCGTTGATTTGGCTCTGAGTGGGCTCACTGATTTTGGCAACTACACCAATTCAGATAAAGAAGAG
ATCATCGCCGCTTACAGCCTAGTTTCGGTAAAAGGAATTGACTGGGCACTCGTTGTAGAAATGCCAGAGAAATTAGCATT
TGCACGTGTCCATCAACTTGAAAAGATTTTTGTCGTGGCCATGTTCGTCGCTATCGTGCTGGTTATTATGGCCTCTCACT
ATTTGTCCAATTTCGTAACCGCTCCACTACTCAAGCTGACATGGGCAGCAGAAAAGGTGTCTGCCGGTGACTTAGATGCC
GCCATGAACAACACCGATCGAAAAGATGAAATTGGTCGTCTCGCTGTGAGTTTTGAAAGAATGCAACGCTCGATCCGCGA
TAAGATGCAACTGATCAAGCAGCAAAATGAAGAGTTAGAAAAAAACTTAAAACTGATTAAAAAACAAAATGATGATTTAC
AGTTAGCAAACAAACTCAAAGATGAGTTTCTCGCGACGACATCTCATGAACTTCGCACACCACTGCACGGGATGATAGGT
ATTGCTGAGGCGTTAGTCTCCGGCGCAAATGGTCCTATTACTTCAGATCATAAATATCAACTCGACATTATCATCAACAG
CGGGCAACGATTAGCAACATTAGTGGACGACTTGCTTGACTATCACAAGATGAGATATGGCAATTTGGATATTGAAACGA
GCGCGGTAGACCTGTCTAGTTCGACACGACTCGTTTTAGAGTTGTCCGCTCATTTGGTTGGCAGTAAACCTCTTAGAATT
ATCAATCAAATATCAGATCAATCGGTATGGGTCAGTGCCGATCCACAACGTGTCGAACAAGTACTCTACAACTTAATTGG
TAACGCGATTAAGTACACTAGTGAAGGGAAAATTGTTATCTCCGCAACTGAAGTAGACAACCATATTCGTGTTCAAGTCG
TGGATACCGGTCAGGGAATACCTGCGGATCAGCTTGATCACATTTTTGAACCATTAATTCAGGCAGGGAGCGACGCCAAT
CGATACAGACAAGGAGCTGGACTTGGCCTATCTATTAGCCGTCAACTTATTGAATTAATGAAAGGTTCACTTTATGTCAG
TAGCCAGCCTATGGTCGGTACTACATTTAGTTTTACTTTGCCGATAGCGAGTGACGAGCAAGTCCAGAATGCCTGCGTTC
GTGAAATGCCTCATTTTCAAGCGCCTGACAATAGTGCCATTGAAACCACTGATACGACAAACTTACCAGAAAACCCAAAC
GGGCCTTTACTGCTTGTGGTCGATGATGAGCCGGTAAACCTAAGAATACTAAACAGCTTTTTACGGTTAGAAGGGTATCG
GGTACACGCAGCTGTAGACGCCAGAGAAGCTCTGGAAAGTATTGCAGAGCAGAAGCCTGAACTTGTGTTGCTCGACATTA
TGATGCCTGGGACAAGCGGATATGAAGTCTGTGAGACGTTGCGACAAACGTATGATCACGCTCAATTACCTATCATAATG
CTCACAGCACTCAACCAAGCCAATGACAGGATTCGAGGTTTTGAAGCCGGGGCAAATGATTACTTATCCAAACCATTCAA
CAAACAAGAGCTGAGTGCGCGCATCAAAGCGCATTTAACAGCAAGTCAGGCAGAGCTCCGCCGCATAGAAAACCAAGAAT
TACACCTTGAACTTAAACAAAGAGCTCTTATCGAATCCAGATTGCTAGAAACTCAAGGTCGACTTTTAGAACAGCTAGAA
GCCTCTCCAGAAGCGATCATTTGTGTTCGTGAAGACAACAAAATTAAATTCGCCAATGAGGCCGCATCCAAGCTATTTAA
GCGCACTAAAGAGCAATTGAAACGCTCTGCGGCAGATGAACTCATTGCTCCTAAGTTTTTACACGTCACACAAGAACACT
ACTGTGGAGCCATTGACGTCTACGTAGAAGATGTTCGCCAGAGCCTATCTGCCGATGTACTGAAGTTACCTGAAGGCTCT
GACTTCAACTCCATGTACATCTTCAACGTAGGTGGCACAATCAATGCTGGAAGGATAAAGAATCTAGAGGCAGCAGTAGA
TGCCCTCTCTAGTTACGCCTTTAATGGAGATAAAGACAAGCTTCAGGAACTCAAAGAACTTGGCGGAGAGTTTACGCGTC
TGGCTGACAAAGTGTCGTCCGACAGCAAGTCCAAACAAGATATCATGAGAGACATCCTCGTTGATGCCATGACCAGCGCT
TTAGATTATTGGGAAAGTGTCACTGGTCAATCCAAGTTTGCATTTGCCGAACAGAGTGGCTTGTGGCGAGTATACCTTGA
TAGAAGCACCTTGCAGACTCGCACATTAGACAAATATTTACGCGTAGAAACATTACCGAAGTCACCACGTTGGCGTACGG
TCTTAAACTCGTTAGAGTACATTCTAGAGCACTGCAACGAGCAAAGCCCCGAACGTGCTCACATAGAAACACTGCGTAAT
AAATTACAGCATCTATTAACTAGCTAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.684	100	0.767