Detailed information NTG0071430

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: S6FBBBH3_RS00575
• Genome accession: NZ_AP018786
• Coordinates: 121298..122254 (+)
• Length: 318 a.a.
• NCBI ID: WP_120175880.1
• Uniprot ID: A0A2Z6IAU8
• Organism: Sutterella megalosphaeroides strain 6FBBBH3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 116298..127254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S6FBBBH3_RS00550 (S6FBBBH3_01040)	-	116730..117098 (+)	369	WP_120175875.1	helix-turn-helix domain-containing protein	-
S6FBBBH3_RS00555 (S6FBBBH3_01050)	ahpC	117239..117802 (+)	564	WP_120175876.1	alkyl hydroperoxide reductase subunit C	-
S6FBBBH3_RS00560 (S6FBBBH3_01060)	-	117986..120013 (+)	2028	WP_120175877.1	hypothetical protein	-
S6FBBBH3_RS00565 (S6FBBBH3_01070)	coaD	120065..120547 (-)	483	WP_120175878.1	pantetheine-phosphate adenylyltransferase	-
S6FBBBH3_RS00570 (S6FBBBH3_01080)	rsmD	120544..121185 (-)	642	WP_170143790.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
S6FBBBH3_RS00575 (S6FBBBH3_01090)	pilA	121298..122254 (+)	957	WP_120175880.1	signal recognition particle-docking protein FtsY	Machinery gene
S6FBBBH3_RS00580 (S6FBBBH3_01100)	-	122337..123809 (+)	1473	WP_120175881.1	Ppx/GppA phosphatase family protein	-
S6FBBBH3_RS00585 (S6FBBBH3_01110)	-	123806..124471 (+)	666	WP_120175882.1	cell division ATP-binding protein FtsE	-
S6FBBBH3_RS00590 (S6FBBBH3_01120)	-	124468..125367 (+)	900	WP_120175883.1	ABC transporter permease	-
S6FBBBH3_RS00595 (S6FBBBH3_01130)	rpoH	125380..126441 (+)	1062	WP_120175884.1	RNA polymerase sigma factor RpoH	-
S6FBBBH3_RS00600 (S6FBBBH3_01140)	trmL	126441..126911 (+)	471	WP_120175885.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-

Sequence

Protein

• Length: 318 a.a.
• Molecular weight: 34311.36 Da
• Isoelectric Point: 5.0147

>NTDB_id=71430 S6FBBBH3_RS00575 WP_120175880.1 121298..122254(+) (pilA) [Sutterella megalosphaeroides strain 6FBBBH3]
MGFGSSEGWLSRLKNGLARTRVNIVGLFSGGVVDEDFLEELEYALITADVGVQTSTRILQRLRDAIKLRGLKTQDEVRLA
LRDELHALLLPAEGTLDLEQAKPLVIMMTGVNGAGKTTSIGKLAKRFAEDGKSVLLAAGDTFRAAAREQLAVWGERNRIE
VISQSGGDPAAVVFDAVNAARARGIDIVIADTAGRLPTQINLMEELRRIRRSQEKAMEGAPHESILVVDGTNGQNALMQV
EAFDKAVTLTGLIITKLDGTAKGGVLAAITQMRREKPLPIYFIGVGEQLEDLQPFRALEFANTLVGLDPATPATEKDD

Nucleotide

• Length: 957 bp

>NTDB_id=71430 S6FBBBH3_RS00575 WP_120175880.1 121298..122254(+) (pilA) [Sutterella megalosphaeroides strain 6FBBBH3]
ATGGGATTTGGATCTTCCGAAGGGTGGCTCTCCCGTCTTAAGAACGGACTCGCCCGCACACGCGTCAACATCGTCGGCCT
CTTTTCGGGCGGCGTGGTCGACGAGGACTTCCTCGAAGAGCTTGAATATGCCTTGATTACGGCCGATGTCGGCGTGCAAA
CTTCCACCCGTATCCTACAACGTTTGCGAGACGCCATTAAGTTGCGCGGTCTCAAAACCCAGGACGAAGTGCGCCTCGCG
CTGCGCGACGAGCTTCACGCCCTGCTTCTGCCCGCCGAAGGGACGCTCGACCTGGAACAGGCCAAGCCGCTCGTCATCAT
GATGACGGGCGTCAACGGCGCCGGCAAAACCACCTCGATCGGCAAACTCGCCAAGCGCTTCGCCGAAGACGGCAAGTCCG
TGCTTCTCGCCGCGGGCGACACCTTCCGTGCCGCGGCCCGCGAACAGTTGGCCGTCTGGGGCGAACGCAACCGCATCGAA
GTCATTTCGCAAAGCGGCGGCGACCCCGCCGCGGTCGTCTTCGACGCCGTCAACGCGGCCCGTGCGCGCGGCATCGACAT
CGTCATCGCCGACACGGCGGGGCGTCTTCCCACGCAGATCAATCTGATGGAAGAGCTGCGCCGCATCCGCCGCTCCCAGG
AAAAGGCCATGGAAGGGGCGCCCCACGAATCCATTCTGGTCGTCGACGGCACGAACGGGCAGAACGCCCTCATGCAGGTC
GAAGCCTTCGACAAGGCGGTGACGCTCACCGGTCTCATCATCACGAAGTTGGACGGCACCGCCAAGGGCGGCGTGCTCGC
CGCCATCACGCAGATGCGCCGCGAAAAGCCGCTCCCCATTTACTTCATCGGCGTGGGCGAGCAGCTCGAAGACCTGCAGC
CCTTCCGAGCGCTCGAATTCGCCAACACGCTCGTCGGGCTCGACCCCGCAACGCCGGCCACCGAAAAGGACGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (26-85)

• SRP54-type protein, GTPase domain (SRP54) (104-305)

3D structure

• AlphaFold DB: A0A2Z6IAU8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	57.096	95.283	0.544