Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   NF392_RS01265 Genome accession   NZ_CP102089
Coordinates   307925..308821 (+) Length   298 a.a.
NCBI ID   WP_049307351.1    Uniprot ID   -
Organism   Staphylococcus capitis subsp. capitis strain H17     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 302925..313821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF392_RS01240 - 303241..303342 (+) 102 WP_016898541.1 SE2200 family small protein -
  NF392_RS01245 - 303526..305067 (+) 1542 WP_023351027.1 NAD(P)H-binding protein -
  NF392_RS01250 - 305260..306744 (-) 1485 WP_002436173.1 alkaline phosphatase -
  NF392_RS01255 - 307071..307223 (+) 153 WP_002436229.1 hypothetical protein -
  NF392_RS01260 braR 307254..307919 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  NF392_RS01265 braS 307925..308821 (+) 897 WP_049307351.1 sensor histidine kinase Regulator
  NF392_RS01270 - 308931..309680 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  NF392_RS01275 - 309706..311691 (+) 1986 WP_228458516.1 ABC transporter permease -
  NF392_RS01280 - 311917..312789 (+) 873 WP_023351032.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34643.00 Da        Isoelectric Point: 5.8756

>NTDB_id=714245 NF392_RS01265 WP_049307351.1 307925..308821(+) (braS) [Staphylococcus capitis subsp. capitis strain H17]
MLLSFIKSIRNEITIIFCIFLLFALIFYLFSLPFSAFGLALGIVLLIIFIHWWVKYLGFKRNEDLKEKIDNLENELTEVK
NRQVEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVQIDNYTSLALSYLKLLNEESDMTISSVTVNEL
IRPLIMKYRIQFIEQHTKIHYKKCEATVLTDAQWASIMIEQILNNALKYARGKDIWIEFDSAKQTLIIKDNGVGISKADI
PKIFDKGYSGYNGRLNEESSGIGLFIVKHISNHLNHEVDVDSELGEGTTFKIHFPNED

Nucleotide


Download         Length: 897 bp        

>NTDB_id=714245 NF392_RS01265 WP_049307351.1 307925..308821(+) (braS) [Staphylococcus capitis subsp. capitis strain H17]
ATGTTGCTATCTTTTATAAAATCGATTCGAAATGAGATTACAATTATATTTTGTATATTTTTATTATTTGCATTAATATT
TTACTTATTTTCATTACCATTTAGTGCCTTCGGTCTTGCGTTAGGAATCGTATTACTCATCATTTTTATTCATTGGTGGG
TAAAGTACCTTGGATTTAAGAGAAATGAGGATCTTAAAGAGAAGATAGATAATTTGGAAAATGAATTAACTGAAGTAAAA
AATCGCCAAGTAGAATATCGTAATGATGTTGAAAGTTACTTTTTAACATGGGTACACCAAATTAAGACACCTATCACAGC
GTCACAACTATTACTCGAACGTAATGAAGAAAATGTTGTCAATCGCGTAAGACAAGAAATTGTTCAAATTGATAACTATA
CAAGCTTAGCATTGAGTTATTTAAAATTACTCAACGAAGAATCTGATATGACAATTTCATCAGTGACAGTGAATGAATTA
ATACGTCCGCTAATCATGAAATATCGAATTCAGTTTATCGAACAACATACTAAAATTCACTATAAAAAGTGTGAAGCAAC
TGTTTTAACGGATGCACAATGGGCGTCTATTATGATAGAACAAATTTTAAATAATGCTTTGAAGTACGCGCGTGGAAAAG
ATATTTGGATTGAATTTGATTCTGCTAAACAAACACTAATCATTAAAGATAATGGTGTAGGTATCAGTAAAGCAGATATT
CCTAAAATATTTGATAAAGGCTATTCTGGTTACAACGGCAGACTTAATGAAGAATCAAGCGGCATAGGATTGTTCATTGT
TAAGCATATTTCTAATCATTTGAATCATGAGGTCGATGTAGATTCAGAACTTGGTGAAGGTACGACATTTAAAATACATT
TTCCCAACGAAGATTAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

64.407

98.993

0.638