Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NF398_RS10795 Genome accession   NZ_CP102087
Coordinates   2195730..2196395 (-) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis subsp. capitis strain K1-2-2-23     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2190730..2201395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF398_RS10775 - 2190860..2191732 (-) 873 WP_023351032.1 DUF4064 domain-containing protein -
  NF398_RS10780 - 2191958..2193943 (-) 1986 WP_228458516.1 ABC transporter permease -
  NF398_RS10785 - 2193969..2194718 (-) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  NF398_RS10790 braS 2194828..2195724 (-) 897 WP_049307351.1 sensor histidine kinase Regulator
  NF398_RS10795 braR 2195730..2196395 (-) 666 WP_002436233.1 response regulator transcription factor Regulator
  NF398_RS10800 - 2196426..2196578 (-) 153 WP_002436229.1 hypothetical protein -
  NF398_RS10805 - 2196905..2198389 (+) 1485 WP_002436173.1 alkaline phosphatase -
  NF398_RS10810 - 2198582..2200123 (-) 1542 WP_023351027.1 NAD(P)H-binding protein -
  NF398_RS10815 - 2200307..2200408 (-) 102 WP_016898541.1 SE2200 family small protein -
  NF398_RS10820 - 2200678..2201304 (+) 627 Protein_2081 FMN-dependent NADH-azoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=714237 NF398_RS10795 WP_002436233.1 2195730..2196395(-) (braR) [Staphylococcus capitis subsp. capitis strain K1-2-2-23]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=714237 NF398_RS10795 WP_002436233.1 2195730..2196395(-) (braR) [Staphylococcus capitis subsp. capitis strain K1-2-2-23]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAACT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCGAGA
ACGGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCATTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGACGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833