Detailed information NTG0071406

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FFJ14_RS00275
• Genome accession: NZ_AP024126
• Coordinates: 45269..46294 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NS-NP030
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 40269..51294

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FFJ14_RS00245 (BvCmsNSNP030_0047)	zapB	40353..40598 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
FFJ14_RS00250 (BvCmsNSNP030_0048)	rraA	40683..41168 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
FFJ14_RS00255 (BvCmsNSNP030_0049)	menA	41261..42187 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FFJ14_RS00260 (BvCmsNSNP030_0050)	hslU	42254..43585 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
FFJ14_RS00265 (BvCmsNSNP030_0051)	hslV	43595..44125 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
FFJ14_RS00270 (BvCmsNSNP030_0052)	ftsN	44218..45177 (-)	960	WP_000068834.1	cell division protein FtsN	-
FFJ14_RS00275 (BvCmsNSNP030_0053)	cytR	45269..46294 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
FFJ14_RS00280 (BvCmsNSNP030_0054)	priA	46450..48648 (-)	2199	WP_001356138.1	primosomal protein N'	Machinery gene
FFJ14_RS00285 (BvCmsNSNP030_0055)	rpmE	48851..49063 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=71406 FFJ14_RS00275 WP_000644904.1 45269..46294(-) (cytR) [Escherichia coli strain NS-NP030]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=71406 FFJ14_RS00275 WP_000644904.1 45269..46294(-) (cytR) [Escherichia coli strain NS-NP030]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628