Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   NQD69_RS02905 Genome accession   NZ_CP101992
Coordinates   507533..508606 (+) Length   357 a.a.
NCBI ID   WP_000796095.1    Uniprot ID   A0A0E1EG10
Organism   Streptococcus agalactiae strain BCJB3586     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 502533..513606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQD69_RS02875 (NQD69_02885) - 503426..504490 (+) 1065 WP_000021309.1 MmcQ/YjbR family DNA-binding protein -
  NQD69_RS02880 (NQD69_02890) asnA 504604..505596 (+) 993 WP_000748017.1 aspartate--ammonia ligase -
  NQD69_RS02885 (NQD69_02895) - 505641..506090 (-) 450 WP_000592263.1 thiol reductase thioredoxin -
  NQD69_RS02890 (NQD69_02900) rsmD 506220..506759 (+) 540 WP_001266830.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NQD69_RS02895 (NQD69_02905) - 506771..507061 (+) 291 WP_000384889.1 hypothetical protein -
  NQD69_RS02900 (NQD69_02910) coaD 507058..507543 (+) 486 WP_000161892.1 pantetheine-phosphate adenylyltransferase -
  NQD69_RS02905 (NQD69_02915) sepM 507533..508606 (+) 1074 WP_000796095.1 SepM family pheromone-processing serine protease Regulator
  NQD69_RS02910 (NQD69_02920) - 508681..510013 (+) 1333 Protein_489 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  NQD69_RS02915 (NQD69_02925) - 510082..510660 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  NQD69_RS02920 (NQD69_02930) rlmN 510711..511817 (+) 1107 WP_001124990.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NQD69_RS02925 (NQD69_02935) - 511817..512332 (+) 516 WP_000919802.1 VanZ family protein -

Sequence


Protein


Download         Length: 357 a.a.        Molecular weight: 39199.43 Da        Isoelectric Point: 10.4385

>NTDB_id=713796 NQD69_RS02905 WP_000796095.1 507533..508606(+) (sepM) [Streptococcus agalactiae strain BCJB3586]
MKNRDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVLSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=713796 NQD69_RS02905 WP_000796095.1 507533..508606(+) (sepM) [Streptococcus agalactiae strain BCJB3586]
GTGAAGAATAGAGATCCAAAAAGAAAACATAAAAGTTTACTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTAGTGAGACTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATTATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTGGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGTACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E1EG10

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.322

94.958

0.658