Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PPM34_RS14105 Genome accession   NZ_CP116869
Coordinates   2750824..2751519 (-) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis subsp. subtilis strain MGP001     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2745824..2756519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PPM34_RS14085 yttA 2746251..2746997 (+) 747 WP_003229141.1 LMBR1 domain-containing protein -
  PPM34_RS14090 bceB 2747034..2748974 (-) 1941 WP_003229139.1 bacitracin ABC transporter permease BceB -
  PPM34_RS14095 bceA 2748964..2749725 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  PPM34_RS14100 bceS 2749827..2750831 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  PPM34_RS14105 braR 2750824..2751519 (-) 696 WP_004399109.1 two-component response regulator BceR Regulator
  PPM34_RS14110 ytrF 2751616..2752926 (-) 1311 WP_004398682.1 ABC transporter permease YtrF -
  PPM34_RS14115 ytrE 2752916..2753611 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  PPM34_RS14120 ytrD 2753626..2754603 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  PPM34_RS14125 ytrC 2754633..2755619 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  PPM34_RS14130 ytrB 2755613..2756491 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=713734 PPM34_RS14105 WP_004399109.1 2750824..2751519(-) (braR) [Bacillus subtilis subsp. subtilis strain MGP001]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=713734 PPM34_RS14105 WP_004399109.1 2750824..2751519(-) (braR) [Bacillus subtilis subsp. subtilis strain MGP001]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377