Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NPS16_RS10080 Genome accession   NZ_CP101986
Coordinates   2113843..2114613 (+) Length   256 a.a.
NCBI ID   WP_002264637.1    Uniprot ID   -
Organism   Streptococcus mutans strain COCC33-14     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2108843..2119613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS16_RS10065 (NPS16_10065) - 2110466..2111128 (-) 663 WP_002262652.1 YoaK family protein -
  NPS16_RS10070 (NPS16_10070) rlmH 2111472..2111951 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NPS16_RS10075 (NPS16_10075) htrA 2112157..2113365 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  NPS16_RS10080 (NPS16_10080) spo0J 2113843..2114613 (+) 771 WP_002264637.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 256 a.a.        Molecular weight: 29506.19 Da        Isoelectric Point: 10.1578

>NTDB_id=713694 NPS16_RS10080 WP_002264637.1 2113843..2114613(+) (spo0J) [Streptococcus mutans strain COCC33-14]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=713694 NPS16_RS10080 WP_002264637.1 2113843..2114613(+) (spo0J) [Streptococcus mutans strain COCC33-14]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTACACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.609

100

0.996