Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   NPS16_RS02465 Genome accession   NZ_CP101986
Coordinates   506624..507664 (+) Length   346 a.a.
NCBI ID   WP_002264420.1    Uniprot ID   -
Organism   Streptococcus mutans strain COCC33-14     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 501624..512664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NPS16_RS02430 (NPS16_02430) - 501818..502882 (+) 1065 WP_258969066.1 MmcQ/YjbR family DNA-binding protein -
  NPS16_RS02435 (NPS16_02435) - 502957..503592 (-) 636 WP_002266335.1 hypothetical protein -
  NPS16_RS02440 (NPS16_02440) - 503723..504163 (-) 441 Protein_444 methyltransferase -
  NPS16_RS02445 (NPS16_02445) - 504401..504604 (+) 204 WP_002266333.1 hypothetical protein -
  NPS16_RS10110 - 504645..504971 (+) 327 Protein_446 hypothetical protein -
  NPS16_RS02455 (NPS16_02455) rsmD 505617..506156 (+) 540 WP_002262037.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NPS16_RS02460 (NPS16_02460) coaD 506146..506646 (+) 501 WP_002266330.1 pantetheine-phosphate adenylyltransferase -
  NPS16_RS02465 (NPS16_02465) sepM 506624..507664 (+) 1041 WP_002264420.1 S16 family serine protease SepM Regulator
  NPS16_RS02470 (NPS16_02470) - 507737..509068 (+) 1332 WP_168753020.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  NPS16_RS02475 (NPS16_02475) - 509065..509613 (+) 549 WP_002266328.1 YutD-like domain-containing protein -
  NPS16_RS02480 (NPS16_02480) rlmN 509610..510695 (+) 1086 WP_002264424.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  NPS16_RS02485 (NPS16_02485) - 510695..511231 (+) 537 WP_258969067.1 VanZ family protein -

Sequence

Protein


Download         Length: 346 a.a.        Molecular weight: 37952.90 Da        Isoelectric Point: 10.1655

>NTDB_id=713638 NPS16_RS02465 WP_002264420.1 506624..507664(+) (sepM) [Streptococcus mutans strain COCC33-14]
MKTNKKFKWWLISGISLILLLMVFFFPLPYYLEMPGGAYDIRSVVTVNHKEDKEKGSYNFVAVSLSKATPIQVLYAWLTP
FTEITSAKETTGGVSDADYMRINQFYMETSQNGAIYKALSLAHKKASFNYMGVYVLQVSKNSTFKGVLNIADTVTGVNDK
TFHSSKELIKYVSGLKLGSKVSVQYTSENKKKTAKGKVIKLSNGKNGIGIGLVDHTKVTSDDKIEFSTNGIGGPSAGLMF
TLDIYDQLVKEDLRKGRIIAGTGTIGEDGSVGDIGGADMKVAAADRINADIFFVPNNPVSKATLKKNPKALTNYQEAKQA
AKKLGTKMKIVPVKNVQEAIDYLRKH

Nucleotide


Download         Length: 1041 bp        

>NTDB_id=713638 NPS16_RS02465 WP_002264420.1 506624..507664(+) (sepM) [Streptococcus mutans strain COCC33-14]
GTGAAAACAAACAAAAAATTTAAATGGTGGCTAATCAGCGGTATCAGTCTTATTTTGCTTTTAATGGTATTCTTTTTTCC
TCTTCCTTACTATTTAGAAATGCCCGGCGGAGCCTATGATATTCGTTCTGTTGTGACGGTTAATCATAAAGAAGATAAAG
AGAAGGGATCTTATAATTTTGTAGCTGTCTCTCTTAGTAAGGCAACCCCCATACAAGTCCTCTATGCTTGGCTGACCCCT
TTTACAGAAATTACCAGTGCCAAGGAAACAACTGGTGGTGTTAGTGATGCGGATTATATGAGGATTAATCAGTTTTATAT
GGAAACCTCACAAAATGGAGCTATCTATAAAGCTCTTTCTTTAGCACATAAAAAGGCAAGCTTTAATTATATGGGTGTTT
ATGTTTTGCAGGTTAGTAAGAATTCAACTTTTAAGGGAGTTTTAAATATTGCTGATACTGTAACAGGCGTTAATGACAAG
ACCTTTCATAGTTCAAAAGAATTGATTAAATATGTGTCTGGACTGAAATTAGGCAGCAAGGTCAGTGTTCAATATACTTC
TGAAAATAAGAAGAAAACAGCCAAGGGTAAAGTTATTAAATTGTCAAATGGCAAAAATGGTATTGGCATTGGCCTGGTTG
ATCATACCAAGGTCACTTCTGATGATAAAATCGAATTTAGCACAAATGGTATTGGAGGGCCAAGTGCCGGTCTCATGTTT
ACCCTTGATATTTACGATCAACTAGTGAAAGAGGACTTACGTAAGGGCCGTATTATTGCAGGTACTGGTACTATTGGAGA
AGACGGGTCTGTTGGGGATATTGGCGGTGCTGATATGAAAGTGGCAGCAGCAGATAGGATTAATGCAGATATCTTTTTTG
TTCCCAATAATCCTGTAAGTAAGGCAACTTTGAAAAAAAATCCCAAAGCTCTCACTAATTATCAAGAAGCTAAGCAGGCT
GCTAAAAAATTAGGCACTAAGATGAAGATTGTCCCTGTTAAAAATGTGCAGGAGGCTATTGATTACCTAAGAAAACACTA
A

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(131-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

99.711

100

0.997