Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | NPS17_RS10135 | Genome accession | NZ_CP101985 |
| Coordinates | 1839323..1839475 (+) | Length | 50 a.a. |
| NCBI ID | WP_372552041.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain COCC33-14R | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1834323..1844475
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPS17_RS08660 (NPS17_08660) | - | 1834355..1834519 (-) | 165 | WP_002273566.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| NPS17_RS08665 (NPS17_08665) | - | 1834559..1834762 (-) | 204 | WP_258968989.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| NPS17_RS08670 (NPS17_08670) | - | 1835063..1835248 (-) | 186 | WP_002263346.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | - |
| NPS17_RS08675 (NPS17_08675) | - | 1835386..1835547 (-) | 162 | WP_002263734.1 | Blp family class II bacteriocin | - |
| NPS17_RS08680 (NPS17_08680) | - | 1835592..1835846 (-) | 255 | WP_002267515.1 | Blp family class II bacteriocin | - |
| NPS17_RS08685 (NPS17_08685) | - | 1836234..1838448 (+) | 2215 | Protein_1669 | peptide cleavage/export ABC transporter | - |
| NPS17_RS08690 (NPS17_08690) | comB | 1838461..1839333 (+) | 873 | WP_374684427.1 | HlyD family efflux transporter periplasmic adaptor subunit | Regulator |
| NPS17_RS10135 | comB | 1839323..1839475 (+) | 153 | WP_372552041.1 | hypothetical protein | Regulator |
| NPS17_RS08695 (NPS17_08695) | - | 1839736..1839879 (-) | 144 | WP_002263740.1 | hypothetical protein | - |
| NPS17_RS08700 (NPS17_08700) | - | 1840171..1841193 (-) | 1023 | WP_258968990.1 | thioredoxin family protein | - |
| NPS17_RS08705 (NPS17_08705) | - | 1841678..1841866 (-) | 189 | WP_002270918.1 | Blp family class II bacteriocin | - |
| NPS17_RS08710 (NPS17_08710) | - | 1842030..1842242 (-) | 213 | WP_002264173.1 | Blp family class II bacteriocin | - |
| NPS17_RS08715 (NPS17_08715) | comC/blpC | 1842507..1842647 (+) | 141 | WP_002270250.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | Regulator |
| NPS17_RS08720 (NPS17_08720) | comD/blpH | 1842789..1844114 (-) | 1326 | WP_002267940.1 | sensor histidine kinase | Regulator |
Sequence
Protein
Download Length: 50 a.a. Molecular weight: 5878.96 Da Isoelectric Point: 10.6821
>NTDB_id=713621 NPS17_RS10135 WP_372552041.1 1839323..1839475(+) (comB) [Streptococcus mutans strain COCC33-14R]
MFFKVTAKAKVSKKDSQTIKYGLQGKTITVVEKKTFFDYYKDKLLNKNQK
MFFKVTAKAKVSKKDSQTIKYGLQGKTITVVEKKTFFDYYKDKLLNKNQK
Nucleotide
Download Length: 153 bp
>NTDB_id=713621 NPS17_RS10135 WP_372552041.1 1839323..1839475(+) (comB) [Streptococcus mutans strain COCC33-14R]
ATGTTTTTTAAAGTGACAGCTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAAC
CATCACAGTTGTTGAAAAAAAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
ATGTTTTTTAAAGTGACAGCTAAAGCAAAAGTTTCTAAAAAAGACAGCCAAACCATTAAATACGGCCTCCAGGGTAAAAC
CATCACAGTTGTTGAAAAAAAGACTTTCTTTGATTATTATAAAGATAAACTGTTAAATAAAAATCAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus mutans UA159 |
100 |
96 |
0.96 |
| comB/nlmE | Streptococcus mutans UA159 |
71.739 |
92 |
0.66 |
| comB | Streptococcus gordonii str. Challis substr. CH1 |
44.444 |
90 |
0.4 |